Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.006G139100.1 |
Family | GH35 |
Protein Properties | Length: 829 Molecular Weight: 91517.7 Isoelectric Point: 6.1248 |
Chromosome | Chromosome/Scaffold: 06 Start: 11623614 End: 11629249 |
Description | beta-galactosidase 7 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 38 | 344 | 0 |
IINGQRKIILSGSIHYPRSTVESCLQMWSDLIQKAKEGGLDTIETYIFWNAHERRRREYNFTGNLDFVKFFQKVQEAGLYGILRIGPYACAEWNYGGFPV WLHNIPEIKFRTDNEIFKNEMQTFTTKIVNMAKEAKLFASQGGPIILAQIENEYGNVMGPYGEAGKSYVQWCAQMAVAQNIGVPWIMCQQSDAPSSVINT CNGFYCDTFTPNSPKSPKMWTENWTGWYKKWGQKDPHRTAEDLAFSVARFFQYNGVLQNYYMYYGGTNFGRTSGGPFIATSYDYDAPLDEYGNLNQPKWG HLKNLHA |
Full Sequence |
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Protein Sequence Length: 829 Download |
MPGSWIGILL IASLGLIGSC SAAAAAAAAV EYDSSAVIIN GQRKIILSGS IHYPRSTVES 60 CLQMWSDLIQ KAKEGGLDTI ETYIFWNAHE RRRREYNFTG NLDFVKFFQK VQEAGLYGIL 120 RIGPYACAEW NYGGFPVWLH NIPEIKFRTD NEIFKNEMQT FTTKIVNMAK EAKLFASQGG 180 PIILAQIENE YGNVMGPYGE AGKSYVQWCA QMAVAQNIGV PWIMCQQSDA PSSVINTCNG 240 FYCDTFTPNS PKSPKMWTEN WTGWYKKWGQ KDPHRTAEDL AFSVARFFQY NGVLQNYYMY 300 YGGTNFGRTS GGPFIATSYD YDAPLDEYGN LNQPKWGHLK NLHAALKLGE KILTNSTVKT 360 TKYSDGWVEL TTYTSNIDGE RLCFLSNTKM DGLDVDLQQD GKYFVPAWSV SILQDCNKET 420 YNTAKVNVQT SLIVKKLHEN DTPLKLSWEW APEPTKAPLH GQGGFKATQL LEQKAATYDE 480 SDYLWYMTSV DNNGTASKNV TLRVKYSGQF LHAFVNGKEI GSQHGYTFTF EKPALLKPGT 540 NIISLLSATV GLQNYGEFFD EGPEGIAGGP VELIDSGNTT TDLSSNEWSY KVGLNGEGGR 600 FYDPTSGRAK WVSGNLRVGR AMTWYKTTFQ APSGTEPVVV DLQGMGKGHA WVNGNSLGRF 660 WPILTADPNG CDGKCDYRGQ YKEGKCLSNC GNPTQRWYHV PRSFLNNGSN TLILFEEIGG 720 NPSDVSFQIT ATETICGNTY EGTTLELSCN GGRRIISDIQ YASFGDPQGS SCGSFQRGSV 780 EASRSFSAVE KACMGKESCS INVSKATFGV EDSFGVDNNR LVVQAVCT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam13364 | BetaGal_dom4_5 | 0.0003 | 450 | 552 | 109 | + Beta-galactosidase jelly roll domain. This domain is found in beta galactosidase enzymes. It has a jelly roll fold. | ||
pfam02140 | Gal_Lectin | 1.0e-12 | 747 | 809 | 66 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 9.0e-21 | 30 | 336 | 366 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 3.0e-157 | 38 | 346 | 324 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 30 | 828 | 831 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAJ09953.1 | 0 | 16 | 827 | 11 | 827 | beta-galactosidase [Mangifera indica] |
EMBL | CBI27773.1 | 0 | 25 | 827 | 35 | 835 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002324727.1 | 0 | 64 | 792 | 1 | 745 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002326135.1 | 0 | 1 | 828 | 1 | 824 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516256.1 | 0 | 13 | 827 | 30 | 848 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 9.80909e-45 | 24 | 342 | 2 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 7e-38 | 30 | 359 | 11 | 348 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 7e-38 | 30 | 359 | 11 | 348 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |