| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.006G144500.2 |
| Family | GH35 |
| Protein Properties | Length: 634 Molecular Weight: 70745.5 Isoelectric Point: 6.4592 |
| Chromosome | Chromosome/Scaffold: 06 Start: 12262304 End: 12268650 |
| Description | beta-galactosidase 12 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 35 | 337 | 0 |
| IINGQRRILISGSIHYPRSTPEMWPDLIQKAKDGGVDVIQTYVFWNGHEPSPGNYYFEDRYDLVKFIKLVQQAGLYLHLRIGPYICAEWNFGGFPVWLKY VPGIEFRTDNGPFKAAMQKFTEKIVGMMKSEKLFENQGGPIILSQIENEYGPVEWEIGAPGKAYTKWAADMAVKLGTGVPWIMCKQEDAPDPMIDTCNGF YCENFKPNKDYKPKIWTEAWTGWYTEFGGAVPHRPAEDMAFSVARFIQNGGSYINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEFGLPREPKWGHLRD LHK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 634 Download |
| MWNVFLLLLL QLLFFFSSRI STVTASVSYD HKAVIINGQR RILISGSIHY PRSTPEMWPD 60 LIQKAKDGGV DVIQTYVFWN GHEPSPGNYY FEDRYDLVKF IKLVQQAGLY LHLRIGPYIC 120 AEWNFGGFPV WLKYVPGIEF RTDNGPFKAA MQKFTEKIVG MMKSEKLFEN QGGPIILSQI 180 ENEYGPVEWE IGAPGKAYTK WAADMAVKLG TGVPWIMCKQ EDAPDPMIDT CNGFYCENFK 240 PNKDYKPKIW TEAWTGWYTE FGGAVPHRPA EDMAFSVARF IQNGGSYINY YMYHGGTNFG 300 RTAGGPFIAT SYDYDAPLDE FGLPREPKWG HLRDLHKAIK LCEPALVSVD PTVTSLGSNQ 360 EAHVFKSKSV CAAFLANYDT KYSVKVTFGN GQYELPPWSV SILPDCKTAV YNTARLGSQS 420 SQMKMVPASS SFSWQSYNEE TASADDDDTT TMNGLWEQIN VTRDATDYLW YLTDVKIDAD 480 EGFLKSGQNP LLTIFSAGHA LHVFINGQLA GTAYGGLSNP KLTFSQNIKL TEGINKISLL 540 SVAVGLPNVG LHFETWNAGV LGPITLKGLN EGTRDLSGQK WSYKIGLKGE SLSLHTASGS 600 ESVEWVEGSL LAQKQALTWY KLLMHHKAMI PWL* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam02449 | Glyco_hydro_42 | 0.0004 | 49 | 185 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. |
| COG1874 | LacA | 1.0e-22 | 27 | 329 | 370 | + Beta-galactosidase [Carbohydrate transport and metabolism] |
| pfam01301 | Glyco_hydro_35 | 9.0e-166 | 35 | 339 | 320 | + Glycosyl hydrolases family 35. |
| PLN03059 | PLN03059 | 0 | 17 | 621 | 605 | + beta-galactosidase; Provisional |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABV32546.1 | 0 | 23 | 621 | 24 | 622 | beta-galactosidase protein 1 [Prunus persica] |
| GenBank | ABY71826.1 | 0 | 1 | 621 | 1 | 622 | beta-galactosidase [Prunus salicina] |
| GenBank | ACC78255.1 | 0 | 10 | 621 | 6 | 617 | beta-galactosidase [Carica papaya] |
| RefSeq | XP_002308268.1 | 0 | 1 | 621 | 1 | 622 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002514108.1 | 0 | 20 | 621 | 23 | 624 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 2.8026e-45 | 35 | 335 | 16 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 9.99995e-41 | 27 | 335 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 9.99995e-41 | 27 | 335 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_B | 9.99995e-41 | 27 | 335 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_A | 9.99995e-41 | 27 | 335 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
