| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.006G203200.3 |
| Family | GT4 |
| Protein Properties | Length: 583 Molecular Weight: 65695.8 Isoelectric Point: 6.5879 |
| Chromosome | Chromosome/Scaffold: 06 Start: 21853825 End: 21857567 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT4 | 336 | 438 | 8.5e-21 |
| AYFLGKMVWAKGYKELIDLLAKHKNDLDGFNLDVFGNGEDANEVQTTAKRLDLNLNFLKGRDHADDSLHGYKVFINPSLSDVLCTATAEALAMGKFVVCA DHP | |||
| Full Sequence |
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| Protein Sequence Length: 583 Download |
| MFACVCLMQE VPPLDVPELL AYLVRQSEPF LDQLGVRKDV CDKIVESLCS SRKNQLLLPS 60 LSSGESTLLD ENANDELDLR IASVLQSTGH CYDGGFWTDL SKHHPSDRKR HVAIVTTASL 120 PWMTGTAVNP LYRAAYLAKS EKQNVTLLVP WLCKSDQELV YPNNLTFTSP EEQENYIRNW 180 LEERIGFKAD FKISFYPGKF AKERRSIIPA GDTSQFIPSK DADIAILEEP EHLNWYHHGK 240 RWTTKFNHVV GVVHTNYLEY IKREKNGALQ AFFVKHINNL VTRAYCHKVL RLSAATQDLP 300 KSVICNVHGV NPKFLKIGEK VAAESELGQQ AFSKGAYFLG KMVWAKGYKE LIDLLAKHKN 360 DLDGFNLDVF GNGEDANEVQ TTAKRLDLNL NFLKGRDHAD DSLHGYKVFI NPSLSDVLCT 420 ATAEALAMGK FVVCADHPSN EYFRSFPNCL TYKTSEDFVA RVKEALANEP HPLTPEQIYN 480 LSWEAATQRF MQYSELDRVL DPEKDDVKLS KTNGRSITKA VSTPNMSEMV DGGLAFAHYC 540 LTGNELLRLC TGAIPGTRDY DKQHCKDLHL LPPQVENPIY GW* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR00032 | argG | 2.0e-10 | 252 | 469 | 245 | + argininosuccinate synthase. argG in bacteria, ARG1 in Saccharomyces cerevisiae. There is a very unusual clustering in the alignment, with a deep split between one cohort of E. coli, H. influenzae, and Streptomyces, and the other cohort of eukaryotes, archaea, and the rest of the eubacteria [Amino acid biosynthesis, Glutamate family]. | ||
| COG0438 | RfaG | 3.0e-11 | 110 | 494 | 394 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] | ||
| pfam00534 | Glycos_transf_1 | 3.0e-11 | 338 | 472 | 142 | + Glycosyl transferases group 1. Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. | ||
| PLN02501 | PLN02501 | 0 | 9 | 582 | 575 | + digalactosyldiacylglycerol synthase | ||
| PLN02846 | PLN02846 | 0 | 107 | 573 | 467 | + digalactosyldiacylglycerol synthase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA55727.1 | 0 | 9 | 582 | 206 | 780 | digalactosyldiacylglycerol synthase 1 [Vigna unguiculata] |
| Swiss-Prot | Q6DW74 | 0 | 9 | 582 | 212 | 786 | DGDG1_LOTJA RecName: Full=Digalactosyldiacylglycerol synthase 1, chloroplastic; Flags: Precursor |
| RefSeq | XP_002264659.1 | 0 | 9 | 582 | 224 | 797 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002323386.1 | 0 | 9 | 582 | 221 | 793 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002533901.1 | 0 | 9 | 582 | 223 | 797 | galactolipid galactosyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2l7c_A | 0.002 | 330 | 348 | 1 | 19 | A Chain A, Biophysical Studies Of Lipid Interacting Regions Of Dgd2 In Arabidopsis Thaliana |
| Metabolic Pathways | |||
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| Pathway Name | Reaction | EC | Protein Name |
| glycolipid biosynthesis | RXN-1225 | EC-2.4.1.241 | digalactosyldiacylglycerol synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO795393 | 404 | 181 | 583 | 0 |
| GO850017 | 334 | 101 | 434 | 0 |
| GO850146 | 328 | 161 | 488 | 0 |
| GO871962 | 321 | 106 | 426 | 0 |
| GO876235 | 345 | 109 | 451 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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