| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.006G203200.4 |
| Family | GT4 |
| Protein Properties | Length: 461 Molecular Weight: 52103.2 Isoelectric Point: 7.0797 |
| Chromosome | Chromosome/Scaffold: 06 Start: 21853825 End: 21856738 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT4 | 214 | 316 | 5.8e-21 |
| AYFLGKMVWAKGYKELIDLLAKHKNDLDGFNLDVFGNGEDANEVQTTAKRLDLNLNFLKGRDHADDSLHGYKVFINPSLSDVLCTATAEALAMGKFVVCA DHP | |||
| Full Sequence |
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| Protein Sequence Length: 461 Download |
| MTGTAVNPLY RAAYLAKSEK QNVTLLVPWL CKSDQELVYP NNLTFTSPEE QENYIRNWLE 60 ERIGFKADFK ISFYPGKFAK ERRSIIPAGD TSQFIPSKDA DIAILEEPEH LNWYHHGKRW 120 TTKFNHVVGV VHTNYLEYIK REKNGALQAF FVKHINNLVT RAYCHKVLRL SAATQDLPKS 180 VICNVHGVNP KFLKIGEKVA AESELGQQAF SKGAYFLGKM VWAKGYKELI DLLAKHKNDL 240 DGFNLDVFGN GEDANEVQTT AKRLDLNLNF LKGRDHADDS LHGYKVFINP SLSDVLCTAT 300 AEALAMGKFV VCADHPSNEY FRSFPNCLTY KTSEDFVARV KEALANEPHP LTPEQIYNLS 360 WEAATQRFMQ YSELDRVLDP EKDDVKLSKT NGRSITKAVS TPNMSEMVDG GLAFAHYCLT 420 GNELLRLCTG AIPGTRDYDK QHCKDLHLLP PQVENPIYGW * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR00032 | argG | 2.0e-10 | 130 | 347 | 245 | + argininosuccinate synthase. argG in bacteria, ARG1 in Saccharomyces cerevisiae. There is a very unusual clustering in the alignment, with a deep split between one cohort of E. coli, H. influenzae, and Streptomyces, and the other cohort of eukaryotes, archaea, and the rest of the eubacteria [Amino acid biosynthesis, Glutamate family]. | ||
| COG0438 | RfaG | 1.0e-10 | 62 | 372 | 320 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] | ||
| pfam00534 | Glycos_transf_1 | 4.0e-11 | 216 | 350 | 142 | + Glycosyl transferases group 1. Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. | ||
| PLN02501 | PLN02501 | 0 | 1 | 460 | 460 | + digalactosyldiacylglycerol synthase | ||
| PLN02846 | PLN02846 | 0 | 1 | 451 | 451 | + digalactosyldiacylglycerol synthase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA55727.1 | 0 | 1 | 460 | 321 | 780 | digalactosyldiacylglycerol synthase 1 [Vigna unguiculata] |
| RefSeq | XP_002264659.1 | 0 | 1 | 460 | 339 | 797 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002308321.1 | 0 | 1 | 460 | 1 | 460 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002323386.1 | 0 | 1 | 460 | 335 | 793 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002533901.1 | 0 | 1 | 460 | 338 | 797 | galactolipid galactosyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2l7c_A | 0.002 | 208 | 226 | 1 | 19 | A Chain A, Biophysical Studies Of Lipid Interacting Regions Of Dgd2 In Arabidopsis Thaliana |
| Metabolic Pathways | |||
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| Pathway Name | Reaction | EC | Protein Name |
| glycolipid biosynthesis | RXN-1225 | EC-2.4.1.241 | digalactosyldiacylglycerol synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO795393 | 404 | 59 | 461 | 0 |
| GO850146 | 328 | 39 | 366 | 0 |
| GO850017 | 312 | 1 | 312 | 0 |
| GO871962 | 304 | 1 | 304 | 0 |
| GO869936 | 326 | 119 | 438 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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