Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.006G219700.1 |
Family | GH9 |
Protein Properties | Length: 471 Molecular Weight: 52599.6 Isoelectric Point: 8.7688 |
Chromosome | Chromosome/Scaffold: 06 Start: 23210147 End: 23213237 |
Description | glycosyl hydrolase 9A4 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 16 | 462 | 0 |
FYDALTKSIIFLEAQRSGKLPPNHRPQWRGDSGLDDGKLANVDLVGGYYDAGDNVKYGLPMAFTVTTLAWGALAYHKELHATGELPHVRSAIKWGTDYFL KASSRKNRLYVQVGDPVLDHQCWVRPENMRTPRTVLRIDENNPGTEIAAETSAAMAAASIVFRHTNRTYSRRLLNKAKLLFEFAKTHKKTFDGECPFYCS FSGYNDELLWSATWLYKATTKPMYLKYIKEEATSAAVAEFSWDLKYAGAQVLLSKLYFEGVKDLESYKKDADSFICSVLPGSPFHQVYISPGGMINLRDG ANTQYVTSTAFLFSVYSDILAEHNQKVQCGNQAFDSTRVMAFAKQQIDYLLGSNPEKRSYMVGFGHNPPVQAHHRGASVPVMSTNTIVNCGTSFANWFNK DAPNPHELTGAFVGGPDRFDNFVDKRWDSSKTEPCTYVNSISVGVLA |
Full Sequence |
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Protein Sequence Length: 471 Download |
MAIKKWRVHV KDCSTFYDAL TKSIIFLEAQ RSGKLPPNHR PQWRGDSGLD DGKLANVDLV 60 GGYYDAGDNV KYGLPMAFTV TTLAWGALAY HKELHATGEL PHVRSAIKWG TDYFLKASSR 120 KNRLYVQVGD PVLDHQCWVR PENMRTPRTV LRIDENNPGT EIAAETSAAM AAASIVFRHT 180 NRTYSRRLLN KAKLLFEFAK THKKTFDGEC PFYCSFSGYN DELLWSATWL YKATTKPMYL 240 KYIKEEATSA AVAEFSWDLK YAGAQVLLSK LYFEGVKDLE SYKKDADSFI CSVLPGSPFH 300 QVYISPGGMI NLRDGANTQY VTSTAFLFSV YSDILAEHNQ KVQCGNQAFD STRVMAFAKQ 360 QIDYLLGSNP EKRSYMVGFG HNPPVQAHHR GASVPVMSTN TIVNCGTSFA NWFNKDAPNP 420 HELTGAFVGG PDRFDNFVDK RWDSSKTEPC TYVNSISVGV LAKLATDGRV * 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02171 | PLN02171 | 1.0e-167 | 19 | 465 | 462 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 2.0e-169 | 18 | 462 | 459 | + Glycosyl hydrolase family 9. | ||
PLN02266 | PLN02266 | 3.0e-172 | 16 | 465 | 461 | + endoglucanase | ||
PLN02909 | PLN02909 | 0 | 1 | 467 | 467 | + Endoglucanase | ||
PLN02613 | PLN02613 | 0 | 12 | 464 | 456 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN82881.1 | 0 | 1 | 465 | 1 | 464 | hypothetical protein [Vitis vinifera] |
EMBL | CBI20730.1 | 0 | 16 | 458 | 33 | 475 | unnamed protein product [Vitis vinifera] |
EMBL | CBI20730.1 | 0 | 16 | 465 | 518 | 967 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_189972.2 | 0 | 16 | 465 | 35 | 484 | AtGH9A4 (Arabidopsis thaliana Glycosyl Hydrolase 9A4); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
RefSeq | XP_002308519.1 | 0 | 1 | 470 | 1 | 470 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 20 | 468 | 9 | 432 | A Chain A, Structural Study Of The Aquifex Aeolicus Ppx-Gppa Enzyme |
PDB | 1ksc_A | 0 | 20 | 468 | 9 | 432 | A Chain A, Structural Study Of The Aquifex Aeolicus Ppx-Gppa Enzyme |
PDB | 1ks8_A | 0 | 20 | 468 | 9 | 432 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 16 | 467 | 6 | 443 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 16 | 467 | 6 | 443 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EC939263 | 307 | 30 | 336 | 0 |
DT735908 | 267 | 205 | 471 | 0 |
EH774439 | 287 | 52 | 338 | 0 |
GR454258 | 270 | 63 | 332 | 0 |
CO113937 | 292 | 44 | 334 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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