Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.006G240200.2 |
Family | GT43 |
Protein Properties | Length: 405 Molecular Weight: 45375.6 Isoelectric Point: 9.8154 |
Chromosome | Chromosome/Scaffold: 06 Start: 24910375 End: 24913771 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT43 | 210 | 390 | 0 |
LAHTLKLVQPPLLWIVVEMTLQSDHTADILRRTGVMYRHLVCNKNLTDIKDRSVHQRNVALSHIEIHHLDGIVHFADDYNTYSADLFEQMRQIRRFGTWT VAKLTGNKNKDFVEGPICNGTQVIGWHVNDSRRRFRRFHADMSGFAFNSTIIWDPKRWHRPTPEPIRQLDTVRDGFQGFIT |
Full Sequence |
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Protein Sequence Length: 405 Download |
MASIRRTLSP VPRAGTLLNG EACQVASPLS KSSSSYSQSY PTSGGFLSSI FGLSDVQAFA 60 YGVFSPRSSR PLERSKSKGQ VWKRALFHFL VSFVIGVFIG LTPFVSMNLS TNPMSKHQAF 120 SFEVVSTVGN FDKHEDMTRN ATTIAERGGL ENSTALEPQV KEEESGDGNS NGTSISLSLS 180 EDVNLVSRKL LIIVTPTHAR PLQAYYLSRL AHTLKLVQPP LLWIVVEMTL QSDHTADILR 240 RTGVMYRHLV CNKNLTDIKD RSVHQRNVAL SHIEIHHLDG IVHFADDYNT YSADLFEQMR 300 QIRRFGTWTV AKLTGNKNKD FVEGPICNGT QVIGWHVNDS RRRFRRFHAD MSGFAFNSTI 360 IWDPKRWHRP TPEPIRQLDT VRDGFQGFIT LNWVTAIQTE ALPP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03360 | Glyco_transf_43 | 3.0e-54 | 210 | 371 | 171 | + Glycosyltransferase family 43. | ||
cd00218 | GlcAT-I | 9.0e-82 | 189 | 386 | 204 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
PLN02458 | PLN02458 | 4.0e-83 | 72 | 371 | 311 | + transferase, transferring glycosyl groups |
Gene Ontology | |
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GO Term | Description |
GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU18893.1 | 0 | 1 | 385 | 1 | 374 | unknown [Glycine max] |
EMBL | CAN81600.1 | 0 | 182 | 403 | 5 | 228 | hypothetical protein [Vitis vinifera] |
EMBL | CBI20871.1 | 0 | 1 | 403 | 1 | 411 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002309550.1 | 0 | 1 | 386 | 1 | 386 | glycosyl transferase [Populus trichocarpa] |
RefSeq | XP_002516557.1 | 0 | 1 | 386 | 1 | 382 | beta-1,3-glucuronyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v84_B | 4e-22 | 193 | 361 | 7 | 184 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 1v84_A | 4e-22 | 193 | 361 | 7 | 184 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 1v83_B | 4e-22 | 193 | 361 | 7 | 184 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 1v83_A | 4e-22 | 193 | 361 | 7 | 184 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 1v82_B | 4e-22 | 193 | 361 | 7 | 184 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |