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Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.007G009600.1 |
Family | GT5 |
Protein Properties | Length: 672 Molecular Weight: 75576.7 Isoelectric Point: 7.9731 |
Chromosome | Chromosome/Scaffold: 07 Start: 748469 End: 759400 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 191 | 655 | 0 |
HIIQICTEMEPLVSVGSLSSYVTGLSKALQKKGHIVEVILPKYACLDLTEMQGLREIEAELYSYFNGQLHGNRIWTGIVHGIGVTLIQPLYYSSFFDRER VYGYSDDFERFTYFSRASLDYIAKSGKQPDVLHIHNWETAIVGPLFWDIFVKQGLGGTRVLLTCHGFDSQCLEQPDKLALCGLDPARLHRPDRLQDHTMT HLVNILKGGLVYSNKVVMVQSIYSKERIINSFSHGLEPTLAIHKDKLLVSPCGFDNSTWDPSKDKFLPKNYSADDLKGKSICKVALQQQLGLSKNSSTVL VGCISTESLDFDLNNQKAVWNATPKSVQFIFMGSKATSADGALEYLKKELKDETVRFINKYDEALLHLIFAGSDIILCQSFHDPLLQVPLKALKYGAAPV AVTSNENKFRHFVDREQETTRFSRFISSTFGYLSLSQAVDEIKNSPSKWKQKMVDAMAKDFSWNA |
Full Sequence |
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Protein Sequence Length: 672 Download |
MKMESIINST ILSLACFPKS NPSIHHQKTV KARRTVCCSL SSSSSKNSNS EGDANGLLKE 60 EEEEKYNDIW LLFKEAQQNI LYLNKLRLVA VEELNKANRE KQLLLDKIQQ LEAVNKLGNE 120 QSLWRELLLR IDSMVLTGLI DSAEASGMRK AVMGNKFSVA LVFFDIRQKT DAELLAQLRH 180 FSVGSRKNGF HIIQICTEME PLVSVGSLSS YVTGLSKALQ KKGHIVEVIL PKYACLDLTE 240 MQGLREIEAE LYSYFNGQLH GNRIWTGIVH GIGVTLIQPL YYSSFFDRER VYGYSDDFER 300 FTYFSRASLD YIAKSGKQPD VLHIHNWETA IVGPLFWDIF VKQGLGGTRV LLTCHGFDSQ 360 CLEQPDKLAL CGLDPARLHR PDRLQDHTMT HLVNILKGGL VYSNKVVMVQ SIYSKERIIN 420 SFSHGLEPTL AIHKDKLLVS PCGFDNSTWD PSKDKFLPKN YSADDLKGKS ICKVALQQQL 480 GLSKNSSTVL VGCISTESLD FDLNNQKAVW NATPKSVQFI FMGSKATSAD GALEYLKKEL 540 KDETVRFINK YDEALLHLIF AGSDIILCQS FHDPLLQVPL KALKYGAAPV AVTSNENKFR 600 HFVDREQETT RFSRFISSTF GYLSLSQAVD EIKNSPSKWK QKMVDAMAKD FSWNAECCDV 660 HVSAYTALKS L* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02939 | PLN02939 | 0.007 | 59 | 112 | 59 | + transferase, transferring glycosyl groups | ||
PRK00654 | glgA | 2.0e-82 | 191 | 655 | 491 | + glycogen synthase; Provisional | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 7.0e-85 | 191 | 655 | 504 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
TIGR02095 | glgA | 2.0e-93 | 190 | 654 | 488 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
PLN02939 | PLN02939 | 3.0e-118 | 123 | 653 | 558 | + transferase, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACD13787.1 | 0 | 46 | 671 | 57 | 687 | starch synthase V precursor [Lotus japonicus] |
GenBank | ACD13788.1 | 0 | 1 | 671 | 5 | 677 | starch synthase V precursor [Solanum tuberosum] |
GenBank | ACD13789.1 | 0 | 3 | 671 | 1 | 682 | starch synthase V precursor [Vitis vinifera] |
RefSeq | XP_002310316.1 | 0 | 1 | 671 | 1 | 669 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528907.1 | 0 | 188 | 653 | 205 | 671 | starch synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3guh_A | 3e-21 | 192 | 654 | 3 | 463 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 2r4u_A | 3e-21 | 192 | 654 | 3 | 463 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 2r4t_A | 3e-21 | 192 | 654 | 3 | 463 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 2qzs_A | 3e-21 | 192 | 654 | 3 | 463 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
PDB | 3cx4_A | 7e-21 | 192 | 654 | 3 | 463 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EY766100 | 284 | 203 | 486 | 0 |
EL455989 | 316 | 159 | 474 | 0 |
DV455772 | 265 | 341 | 604 | 0 |
EY764753 | 237 | 162 | 398 | 0 |
EY764753 | 27 | 401 | 427 | 0.18 |
Sequence Alignments (This image is cropped. Click for full image.) |
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