Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.007G009600.4 |
Family | GT5 |
Protein Properties | Length: 607 Molecular Weight: 68379.7 Isoelectric Point: 7.8319 |
Chromosome | Chromosome/Scaffold: 07 Start: 748469 End: 759404 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 187 | 570 | 0 |
HIIQICTEMEPLVSVGSLSSYVTGLSKALQKKGHIVEVILPKYACLDLTEMQGLREIEAELYSYFNGQLHGNRIWTGIVHGIGVTLIQPLYYSSFFDRER VYGYSDDFERFTYFSRASLDYIAKSGKQPDVLHIHNWETAIVGPLFWDIFVKQGLGGTRVLLTCHGFDSQCLEQPDKLALCGLDPARLHRPDRLQDHTMT HLVNILKGGLVYSNKVVMVQSIYSKERIINSFSHGLEPTLAIHKDKLLVSPCGFDNSTWDPSKDKFLPKNYSADDLKGKSICKVALQQQLGLSKNSSTVL VGCISTESLDFDLNNQKAVWNATPKSVQFIFMGSKATSADGALEYLKKELKDETVRFINKYDEALLHLIFAGSDIILCQSFHDP |
Full Sequence |
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Protein Sequence Length: 607 Download |
MKMESIINST ILSLACFPKS NPSIHHQKTV KARRTVCCSL SKNSNSEGDA NGLLKEEEEE 60 KYNDIWLLFK EAQQNILYLN KLRLVAVEEL NKANREKQLL LDKIQQLEAV NKLGNEQSLW 120 RELLLRIDSM VLTGLIDSAE ASGMRKAVMG NKFSVALVFF DIRQKTDAEL LAQLRHFSVG 180 SRKNGFHIIQ ICTEMEPLVS VGSLSSYVTG LSKALQKKGH IVEVILPKYA CLDLTEMQGL 240 REIEAELYSY FNGQLHGNRI WTGIVHGIGV TLIQPLYYSS FFDRERVYGY SDDFERFTYF 300 SRASLDYIAK SGKQPDVLHI HNWETAIVGP LFWDIFVKQG LGGTRVLLTC HGFDSQCLEQ 360 PDKLALCGLD PARLHRPDRL QDHTMTHLVN ILKGGLVYSN KVVMVQSIYS KERIINSFSH 420 GLEPTLAIHK DKLLVSPCGF DNSTWDPSKD KFLPKNYSAD DLKGKSICKV ALQQQLGLSK 480 NSSTVLVGCI STESLDFDLN NQKAVWNATP KSVQFIFMGS KATSADGALE YLKKELKDET 540 VRFINKYDEA LLHLIFAGSD IILCQSFHDP LLQVPVSREL FSSKQNLQCI CFLSGRSEIQ 600 VITYTK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02939 | PLN02939 | 0.006 | 45 | 108 | 69 | + transferase, transferring glycosyl groups | ||
PRK00654 | glgA | 2.0e-77 | 187 | 563 | 389 | + glycogen synthase; Provisional | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 1.0e-80 | 187 | 563 | 395 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
TIGR02095 | glgA | 9.0e-85 | 186 | 579 | 417 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
PLN02939 | PLN02939 | 9.0e-112 | 119 | 570 | 468 | + transferase, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACD13787.1 | 0 | 42 | 576 | 57 | 595 | starch synthase V precursor [Lotus japonicus] |
GenBank | ACD13788.1 | 0 | 1 | 576 | 5 | 586 | starch synthase V precursor [Solanum tuberosum] |
GenBank | ACD13789.1 | 0 | 3 | 576 | 1 | 591 | starch synthase V precursor [Vitis vinifera] |
RefSeq | XP_002310316.1 | 0 | 1 | 576 | 1 | 578 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528907.1 | 0 | 184 | 576 | 205 | 598 | starch synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3guh_A | 7e-16 | 188 | 570 | 3 | 378 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
PDB | 2r4u_A | 7e-16 | 188 | 570 | 3 | 378 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
PDB | 2r4t_A | 7e-16 | 188 | 570 | 3 | 378 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
PDB | 2qzs_A | 7e-16 | 188 | 570 | 3 | 378 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
PDB | 3cx4_A | 0.000000000000002 | 188 | 570 | 3 | 378 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EY766100 | 284 | 199 | 482 | 0 |
EL455989 | 316 | 155 | 470 | 0 |
EY764753 | 237 | 158 | 394 | 0 |
HO805493 | 257 | 132 | 388 | 0 |
EY764753 | 27 | 397 | 423 | 0.16 |
Sequence Alignments (This image is cropped. Click for full image.) |
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