| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.007G009600.6 |
| Family | GT5 |
| Protein Properties | Length: 432 Molecular Weight: 48862.3 Isoelectric Point: 8.0357 |
| Chromosome | Chromosome/Scaffold: 07 Start: 752543 End: 759404 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 188 | 428 | 0 |
| HIIQICTEMEPLVSVGSLSSYVTGLSKALQKKGHIVEVILPKYACLDLTEMQGLREIEAELYSYFNGQLHGNRIWTGIVHGIGVTLIQPLYYSSFFDRER VYGYSDDFERFTYFSRASLDYIAKSGKQPDVLHIHNWETAIVGPLFWDIFVKQGLGGTRVLLTCHGFDSQCLEQPDKLALCGLDPARLHRPDRLQDHTMT HLVNILKGGLVYSNKVVMVQSIYSKERIINSFSHGLEPTLA | |||
| Full Sequence |
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| Protein Sequence Length: 432 Download |
| MKMESIINST ILSLACFPKS NPSIHHQKTV KARRTVCCSL SSKNSNSEGD ANGLLKEEEE 60 EKYNDIWLLF KEAQQNILYL NKLRLVAVEE LNKANREKQL LLDKIQQLEA VNKLGNEQSL 120 WRELLLRIDS MVLTGLIDSA EASGMRKAVM GNKFSVALVF FDIRQKTDAE LLAQLRHFSV 180 GSRKNGFHII QICTEMEPLV SVGSLSSYVT GLSKALQKKG HIVEVILPKY ACLDLTEMQG 240 LREIEAELYS YFNGQLHGNR IWTGIVHGIG VTLIQPLYYS SFFDRERVYG YSDDFERFTY 300 FSRASLDYIA KSGKQPDVLH IHNWETAIVG PLFWDIFVKQ GLGGTRVLLT CHGFDSQCLE 360 QPDKLALCGL DPARLHRPDR LQDHTMTHLV NILKGGLVYS NKVVMVQSIY SKERIINSFS 420 HGLEPTLAIH K* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02939 | PLN02939 | 0.001 | 19 | 109 | 96 | + transferase, transferring glycosyl groups |
| PRK00654 | glgA | 6.0e-45 | 188 | 430 | 246 | + glycogen synthase; Provisional |
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 6.0e-45 | 188 | 431 | 249 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| TIGR02095 | glgA | 1.0e-49 | 187 | 431 | 251 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. |
| PLN02939 | PLN02939 | 2.0e-84 | 120 | 430 | 311 | + transferase, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACD13787.1 | 0 | 43 | 431 | 57 | 446 | starch synthase V precursor [Lotus japonicus] |
| GenBank | ACD13788.1 | 0 | 1 | 431 | 5 | 439 | starch synthase V precursor [Solanum tuberosum] |
| GenBank | ACD13789.1 | 0 | 3 | 431 | 1 | 443 | starch synthase V precursor [Vitis vinifera] |
| RefSeq | NP_569018.1 | 0 | 59 | 431 | 60 | 427 | soluble glycogen synthase-related [Arabidopsis thaliana] |
| RefSeq | XP_002310316.1 | 0 | 1 | 431 | 1 | 432 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3cx4_A | 0.0000009 | 188 | 424 | 2 | 229 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
| PDB | 3cop_A | 0.0000009 | 188 | 424 | 2 | 229 | A Chain A, Crystal Structure Of E.Coli Gs Mutant E377a In Complex With Adp And Acceptor Analogue Heppso |
| PDB | 3guh_A | 0.0000009 | 188 | 424 | 2 | 229 | A Chain A, Crystal Structure Of E.Coli Gs Mutant E377a In Complex With Adp And Acceptor Analogue Heppso |
| PDB | 2r4u_A | 0.0000009 | 188 | 424 | 2 | 229 | A Chain A, Crystal Structure Of E.Coli Gs Mutant E377a In Complex With Adp And Acceptor Analogue Heppso |
| PDB | 2r4t_A | 0.0000009 | 188 | 424 | 2 | 229 | A Chain A, Crystal Structure Of E.Coli Gs Mutant E377a In Complex With Adp And Acceptor Analogue Heppso |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EL455989 | 276 | 156 | 431 | 0 |
| EY764753 | 242 | 159 | 400 | 0 |
| HO805493 | 257 | 133 | 389 | 0 |
| EY766100 | 232 | 200 | 431 | 0 |
| EY764753 | 27 | 398 | 424 | 0.13 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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