| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.007G010000.1 |
| Family | GH5 |
| Protein Properties | Length: 529 Molecular Weight: 59309.1 Isoelectric Point: 5.6042 |
| Chromosome | Chromosome/Scaffold: 07 Start: 784891 End: 790301 |
| Description | |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH5 | 212 | 504 | 5.10073e-43 |
| HQAKEVLKKHRNSFITMDDFSFLYRRGINTVRIPVGWWIAFDPDPPAPFIGGCLEALDNAFSWAQQVAYNIKCVIDLHAAPGSQNGAEHSASRDGTTGWP SSPDYVSKTLDVIDFLASRYGRHPALLGIELLNEPSASLVPMEVLVPYYKQGYEIVRKYSSTAYVIICQRIGNADPIELYQMNISSHNLVVDLHFYNLFD SYFVNMSTMDNIDFVYKSRAAQLQALNSANGPLVFVGEWVNEWSVTTASQTDYQDFGRAQLEVYNAASFGWAYWTLKNDRKHWDFEWNIRNNY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 529 Download |
| MELGFSKWVL AFALSSWLLF SRAYSVEGLR GNSKVRGVNL GGWLVIEGWI KPSLFDAIPN 60 GDMLDGTGVR FMSVSSHKYV SAENGGGMGV TVYRDVAFSW ETFKLWRVSA SEFQLRTSQG 120 YFLACYGEGC SISATANSPS EGEIFYIERN NNNQVHIKLI TGAYLQVTVG NLLTADYPGK 180 PGWDDNAATF EMMIVANDLH GDYQLANGYG RHQAKEVLKK HRNSFITMDD FSFLYRRGIN 240 TVRIPVGWWI AFDPDPPAPF IGGCLEALDN AFSWAQQVAY NIKCVIDLHA APGSQNGAEH 300 SASRDGTTGW PSSPDYVSKT LDVIDFLASR YGRHPALLGI ELLNEPSASL VPMEVLVPYY 360 KQGYEIVRKY SSTAYVIICQ RIGNADPIEL YQMNISSHNL VVDLHFYNLF DSYFVNMSTM 420 DNIDFVYKSR AAQLQALNSA NGPLVFVGEW VNEWSVTTAS QTDYQDFGRA QLEVYNAASF 480 GWAYWTLKND RKHWDFEWNI RNNYLQLGKI SSFLFCILPP PLFSSLML* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00257 | Fascin | 2.0e-6 | 77 | 176 | 100 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| pfam00150 | Cellulase | 4.0e-16 | 221 | 490 | 276 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 1.0e-19 | 199 | 511 | 348 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI33153.1 | 0 | 1 | 508 | 60 | 565 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002262875.1 | 0 | 1 | 508 | 48 | 551 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310872.1 | 0 | 35 | 528 | 1 | 494 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002438060.1 | 0 | 11 | 517 | 8 | 526 | hypothetical protein SORBIDRAFT_10g007500 [Sorghum bicolor] |
| RefSeq | XP_002533566.1 | 0 | 26 | 508 | 8 | 488 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3n9k_A | 4e-28 | 190 | 497 | 34 | 375 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
| PDB | 3n9k_A | 0.002 | 32 | 69 | 11 | 48 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
| PDB | 2pc8_A | 6e-28 | 188 | 497 | 33 | 376 | A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A |
| PDB | 2pc8_A | 0.002 | 32 | 69 | 12 | 49 | A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A |
| PDB | 1eqp_A | 1e-27 | 188 | 497 | 27 | 370 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
