Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.007G018100.1 |
Family | GH35 |
Protein Properties | Length: 848 Molecular Weight: 94255.9 Isoelectric Point: 7.1366 |
Chromosome | Chromosome/Scaffold: 07 Start: 1388222 End: 1394092 |
Description | beta-galactosidase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 36 | 339 | 0 |
IMINGQRRILFSGSIHYPRSTPDMWEDLIQKAKDGGIDVIETYVFWNVHEPTPGNYHFEGRYDIVRFMKTIQRAGLYAHLRIGPYVCAEWNFGGFPVWLK YVPGISFRTDNEPFKRAMQGFTEKIVGLMKAENLFESQGGPIILSQIENEYGVQSKLFGAAGYNYMTWAANMAIQTGTGVPWVMCKEDDAPDPVINTCNG FYCDSFAPNKPYKPTIWTEAWSGWFSEFGGTIHQRPVQDLAFAVAKFIQKGGSFINYYMFHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIRQPKYGHLK ELHR |
Full Sequence |
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Protein Sequence Length: 848 Download |
MGTNSAYKLC SLVFLVVFLG CSELIQCSVT YDRKAIMING QRRILFSGSI HYPRSTPDMW 60 EDLIQKAKDG GIDVIETYVF WNVHEPTPGN YHFEGRYDIV RFMKTIQRAG LYAHLRIGPY 120 VCAEWNFGGF PVWLKYVPGI SFRTDNEPFK RAMQGFTEKI VGLMKAENLF ESQGGPIILS 180 QIENEYGVQS KLFGAAGYNY MTWAANMAIQ TGTGVPWVMC KEDDAPDPVI NTCNGFYCDS 240 FAPNKPYKPT IWTEAWSGWF SEFGGTIHQR PVQDLAFAVA KFIQKGGSFI NYYMFHGGTN 300 FGRSAGGPFI TTSYDYDAPI DEYGLIRQPK YGHLKELHRS IKMCERALVS VDPIITQLGT 360 YQQVHVYSTE SGDCAAFLAN YDTKSAARVL FNNMHYNLPP WSISILPDCR NVVFNTAKVG 420 VQTSQMEMLP TNGIFSWESY DEDISSLDDS STFTTAGLLE QINVTRDASD YLWYMTSVDI 480 GSSESFLHGG ELPTLIIQST GHAVHIFING QLSGSAFGTR ENRRFTYTGK VNLRPGTNRI 540 ALLSVAVGLP NVGGHYESWN TGILGPVALH GLDQGKWDLS WQKWTYQVGL KGEAMNLLSP 600 DSVTSVEWMQ SSLAAQRPQP LTWHKAYFNA PEGDEPLALD MEGMGKGQIW INGQSIGRYW 660 TAYASGNCNG CSYAGTFRPT KCQLGCGQPT QRWYHVPRSW LKPTNNLLVV FEELGGDPSR 720 ISLVKRSLAS VCAEVSEFHP TIKNWQIESY GRAEEFHSPK VHLRCSGGQS ITSIKFASFG 780 TPLGTCGSYQ QGACHASTSY AILEKKCIGK QRCAVTISNS NFGQDPCPNV MKKLSVEAVC 840 APTNWRG* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.0002 | 51 | 189 | 155 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 8.0e-21 | 29 | 331 | 366 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 1.0e-24 | 763 | 840 | 82 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 1.0e-160 | 35 | 341 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 12 | 841 | 833 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAW47739.1 | 0 | 1 | 842 | 1 | 841 | beta-galactosidase [Prunus persica] |
DDBJ | BAD91082.1 | 0 | 1 | 842 | 1 | 842 | beta-D-galactosidase [Pyrus pyrifolia] |
EMBL | CAB16852.1 | 0 | 1 | 846 | 1 | 852 | beta-galactosidase like protein [Arabidopsis thaliana] |
RefSeq | XP_002274449.1 | 0 | 1 | 842 | 1 | 842 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310279.1 | 0 | 1 | 847 | 1 | 847 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 33 | 337 | 12 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.0002 | 465 | 731 | 374 | 591 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 3e-40 | 29 | 337 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 3e-40 | 29 | 337 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |