| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.007G018100.3 |
| Family | GH35 |
| Protein Properties | Length: 696 Molecular Weight: 76718.6 Isoelectric Point: 6.7389 |
| Chromosome | Chromosome/Scaffold: 07 Start: 1388222 End: 1394092 |
| Description | beta-galactosidase 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 1 | 187 | 0 |
| MQGFTEKIVGLMKAENLFESQGGPIILSQIENEYGVQSKLFGAAGYNYMTWAANMAIQTGTGVPWVMCKEDDAPDPVINTCNGFYCDSFAPNKPYKPTIW TEAWSGWFSEFGGTIHQRPVQDLAFAVAKFIQKGGSFINYYMFHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIRQPKYGHLKELHR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 696 Download |
| MQGFTEKIVG LMKAENLFES QGGPIILSQI ENEYGVQSKL FGAAGYNYMT WAANMAIQTG 60 TGVPWVMCKE DDAPDPVINT CNGFYCDSFA PNKPYKPTIW TEAWSGWFSE FGGTIHQRPV 120 QDLAFAVAKF IQKGGSFINY YMFHGGTNFG RSAGGPFITT SYDYDAPIDE YGLIRQPKYG 180 HLKELHRSIK MCERALVSVD PIITQLGTYQ QVHVYSTESG DCAAFLANYD TKSAARVLFN 240 NMHYNLPPWS ISILPDCRNV VFNTAKVGVQ TSQMEMLPTN GIFSWESYDE DISSLDDSST 300 FTTAGLLEQI NVTRDASDYL WYMTSVDIGS SESFLHGGEL PTLIIQSTGH AVHIFINGQL 360 SGSAFGTREN RRFTYTGKVN LRPGTNRIAL LSVAVGLPNV GGHYESWNTG ILGPVALHGL 420 DQGKWDLSWQ KWTYQVGLKG EAMNLLSPDS VTSVEWMQSS LAAQRPQPLT WHKAYFNAPE 480 GDEPLALDME GMGKGQIWIN GQSIGRYWTA YASGNCNGCS YAGTFRPTKC QLGCGQPTQR 540 WYHVPRSWLK PTNNLLVVFE ELGGDPSRIS LVKRSLASVC AEVSEFHPTI KNWQIESYGR 600 AEEFHSPKVH LRCSGGQSIT SIKFASFGTP LGTCGSYQQG ACHASTSYAI LEKKCIGKQR 660 CAVTISNSNF GQDPCPNVMK KLSVEAVCAP TNWRG* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02140 | Gal_Lectin | 1.0e-24 | 611 | 688 | 82 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 5.0e-76 | 1 | 189 | 204 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 1 | 689 | 690 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAW47739.1 | 0 | 1 | 690 | 152 | 841 | beta-galactosidase [Prunus persica] |
| DDBJ | BAD91082.1 | 0 | 1 | 690 | 152 | 842 | beta-D-galactosidase [Pyrus pyrifolia] |
| EMBL | CAB16852.1 | 0 | 1 | 694 | 154 | 852 | beta-galactosidase like protein [Arabidopsis thaliana] |
| RefSeq | XP_002274449.1 | 0 | 1 | 690 | 152 | 842 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310279.1 | 0 | 1 | 695 | 153 | 847 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 1e-17 | 20 | 185 | 149 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.0001 | 313 | 579 | 374 | 591 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 0.0000000004 | 9 | 185 | 141 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 0.0000000004 | 9 | 185 | 141 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| HO778160 | 577 | 1 | 576 | 0 |
| HO800641 | 351 | 207 | 554 | 0 |
| HO800641 | 181 | 64 | 213 | 0 |
| HO780602 | 584 | 1 | 575 | 0 |
| HO795552 | 490 | 1 | 490 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |