Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.007G022000.2 |
Family | GH5 |
Protein Properties | Length: 436 Molecular Weight: 49466.1 Isoelectric Point: 10.2305 |
Chromosome | Chromosome/Scaffold: 07 Start: 1674090 End: 1677481 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 40 | 334 | 1.1e-32 |
NGSPYYANGFNAYWLMYTASDPSQRSKVSAAFREAASHGLTVARTWAFSDGGYSPLQYSPGSYNEQMFKGLDFVIAEARRYGIKLILSLANNYDSFGGKK QYVNWARSRGQYLTSDDDFFRHPVVKGYYKNHIKTVLYRYNSFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASFVKSIDRNHLLEAGLEG FYGPSTPQRNRLNPGLKIGTDFIANNRIPGIDFATAHAYPDQWLSSSSDQSQLSFLNNWLDTHIQDAQNILRKPILIAEFGKSWKDPGFSTYQRD |
Full Sequence |
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Protein Sequence Length: 436 Download |
MRHLTLVLLL TILIHQGCLH FHVEAGDGFI RARGVQFLLN GSPYYANGFN AYWLMYTASD 60 PSQRSKVSAA FREAASHGLT VARTWAFSDG GYSPLQYSPG SYNEQMFKGL DFVIAEARRY 120 GIKLILSLAN NYDSFGGKKQ YVNWARSRGQ YLTSDDDFFR HPVVKGYYKN HIKTVLYRYN 180 SFTGIHYKDD PTIMAWELMN EPRCTSDPSG RTIQAWITEM ASFVKSIDRN HLLEAGLEGF 240 YGPSTPQRNR LNPGLKIGTD FIANNRIPGI DFATAHAYPD QWLSSSSDQS QLSFLNNWLD 300 THIQDAQNIL RKPILIAEFG KSWKDPGFST YQRDLVFNTV YYKIYSSAKR GGAAAGGLFW 360 QLLTEGMGNF RDGYEIVLGQ PSSTANVIAQ QAHKLNQIRK IFLRMRNVER WKRARAARAR 420 RGRWQGGKKG KRIGN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3934 | COG3934 | 2.0e-24 | 37 | 374 | 339 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABV32548.1 | 0 | 1 | 435 | 1 | 433 | endo-1,4-beta-mannosidase protein 2 [Prunus persica] |
GenBank | ABY58035.1 | 0 | 1 | 435 | 1 | 433 | mannase [Prunus salicina] |
RefSeq | XP_002264115.1 | 0 | 1 | 435 | 1 | 433 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310816.1 | 0 | 55 | 435 | 1 | 381 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002327685.1 | 0 | 14 | 435 | 14 | 435 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 25 | 398 | 2 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 38 | 372 | 21 | 352 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 38 | 372 | 21 | 352 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 38 | 372 | 21 | 352 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 38 | 372 | 21 | 352 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |