y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.007G038300.1 |
Family | AA1 |
Protein Properties | Length: 548 Molecular Weight: 61214.5 Isoelectric Point: 9.034 |
Chromosome | Chromosome/Scaffold: 07 Start: 3011578 End: 3015618 |
Description | SKU5 similar 17 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 42 | 504 | 0 |
WTVTYGTVKLLDVPQQVILINGQFPGPRLDVVTNDNIILNLFNKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSFTYFPSTL LHRAAGGYGAINIYERPRIPIPFPVPDGDFTLLIGDWYKTSHKTLQAYLDSGKTLPFPDGVLINGQTYSTFSGDQGKTYMFRISNMGMSTSLNFRIQGHS MKLVEVEGSHTVQNIYDSLDVHVGQSVAVLVTLNQAPKDYYIIASTRFNRKILTTTAVLHYSNSRTPASGPLPAAPSYGYHGSMMQARTYKWNLTASAAR PNPQGSYHYGKITPTKTIELANSAPLINGKQRYAVNRVSYINSDTPLKLADYFGIPGVFSVDSIESSPSGGAAFLSTSVMSANLHDFLEVVFQNDEKTMQ SWHLDGYDFWVIGYGNGQWTSAKRSMYNLVDALTRHTVQVYPKSWTAIYVSLDNQGMWNMRSA |
Full Sequence |
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Protein Sequence Length: 548 Download |
MAFFIFADPM GNAVLLHLLC GVLAVLSASL VNADDPYRYY TWTVTYGTVK LLDVPQQVIL 60 INGQFPGPRL DVVTNDNIIL NLFNKLDQPF LLTWNGIKQR KNSWQDGVLG TNCPIPPNSN 120 YTYKFQTKDQ IGSFTYFPST LLHRAAGGYG AINIYERPRI PIPFPVPDGD FTLLIGDWYK 180 TSHKTLQAYL DSGKTLPFPD GVLINGQTYS TFSGDQGKTY MFRISNMGMS TSLNFRIQGH 240 SMKLVEVEGS HTVQNIYDSL DVHVGQSVAV LVTLNQAPKD YYIIASTRFN RKILTTTAVL 300 HYSNSRTPAS GPLPAAPSYG YHGSMMQART YKWNLTASAA RPNPQGSYHY GKITPTKTIE 360 LANSAPLING KQRYAVNRVS YINSDTPLKL ADYFGIPGVF SVDSIESSPS GGAAFLSTSV 420 MSANLHDFLE VVFQNDEKTM QSWHLDGYDF WVIGYGNGQW TSAKRSMYNL VDALTRHTVQ 480 VYPKSWTAIY VSLDNQGMWN MRSALWERQY LGQQFYLRVW TQVHSLANEY DIPSNALRCG 540 KAIGIHS* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02835 | PLN02835 | 0 | 27 | 547 | 521 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 27 | 545 | 529 | + copper ion binding / oxidoreductase | ||
PLN02991 | PLN02991 | 0 | 29 | 547 | 520 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 29 | 542 | 519 | + oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 36 | 541 | 524 | + copper ion binding / pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN72538.1 | 0 | 10 | 546 | 41 | 591 | hypothetical protein [Vitis vinifera] |
EMBL | CBI18560.1 | 0 | 10 | 546 | 1 | 534 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002270831.1 | 0 | 10 | 546 | 2 | 535 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310162.1 | 0 | 10 | 547 | 1 | 538 | multicopper oxidase [Populus trichocarpa] |
RefSeq | XP_002522337.1 | 0 | 32 | 547 | 24 | 539 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 38 | 540 | 4 | 539 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1asq_A | 0 | 38 | 540 | 4 | 539 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1asp_B | 0 | 38 | 540 | 4 | 539 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1asp_A | 0 | 38 | 540 | 4 | 539 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1aso_B | 0 | 38 | 540 | 4 | 539 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |