Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.007G038300.2 |
Family | AA1 |
Protein Properties | Length: 539 Molecular Weight: 60174.2 Isoelectric Point: 9.1478 |
Chromosome | Chromosome/Scaffold: 07 Start: 3011578 End: 3015776 |
Description | SKU5 similar 17 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 33 | 495 | 0 |
WTVTYGTVKLLDVPQQVILINGQFPGPRLDVVTNDNIILNLFNKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSFTYFPSTL LHRAAGGYGAINIYERPRIPIPFPVPDGDFTLLIGDWYKTSHKTLQAYLDSGKTLPFPDGVLINGQTYSTFSGDQGKTYMFRISNMGMSTSLNFRIQGHS MKLVEVEGSHTVQNIYDSLDVHVGQSVAVLVTLNQAPKDYYIIASTRFNRKILTTTAVLHYSNSRTPASGPLPAAPSYGYHGSMMQARTYKWNLTASAAR PNPQGSYHYGKITPTKTIELANSAPLINGKQRYAVNRVSYINSDTPLKLADYFGIPGVFSVDSIESSPSGGAAFLSTSVMSANLHDFLEVVFQNDEKTMQ SWHLDGYDFWVIGYGNGQWTSAKRSMYNLVDALTRHTVQVYPKSWTAIYVSLDNQGMWNMRSA |
Full Sequence |
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Protein Sequence Length: 539 Download |
MGNAVLLHLL CGVLAVLSAS LVNADDPYRY YTWTVTYGTV KLLDVPQQVI LINGQFPGPR 60 LDVVTNDNII LNLFNKLDQP FLLTWNGIKQ RKNSWQDGVL GTNCPIPPNS NYTYKFQTKD 120 QIGSFTYFPS TLLHRAAGGY GAINIYERPR IPIPFPVPDG DFTLLIGDWY KTSHKTLQAY 180 LDSGKTLPFP DGVLINGQTY STFSGDQGKT YMFRISNMGM STSLNFRIQG HSMKLVEVEG 240 SHTVQNIYDS LDVHVGQSVA VLVTLNQAPK DYYIIASTRF NRKILTTTAV LHYSNSRTPA 300 SGPLPAAPSY GYHGSMMQAR TYKWNLTASA ARPNPQGSYH YGKITPTKTI ELANSAPLIN 360 GKQRYAVNRV SYINSDTPLK LADYFGIPGV FSVDSIESSP SGGAAFLSTS VMSANLHDFL 420 EVVFQNDEKT MQSWHLDGYD FWVIGYGNGQ WTSAKRSMYN LVDALTRHTV QVYPKSWTAI 480 YVSLDNQGMW NMRSALWERQ YLGQQFYLRV WTQVHSLANE YDIPSNALRC GKAIGIHS* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02835 | PLN02835 | 0 | 18 | 538 | 521 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 18 | 536 | 529 | + copper ion binding / oxidoreductase | ||
PLN02991 | PLN02991 | 0 | 20 | 538 | 520 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 20 | 533 | 519 | + oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 27 | 532 | 524 | + copper ion binding / pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN72538.1 | 0 | 1 | 537 | 41 | 591 | hypothetical protein [Vitis vinifera] |
EMBL | CBI18560.1 | 0 | 1 | 537 | 1 | 534 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002270831.1 | 0 | 1 | 537 | 2 | 535 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310162.1 | 0 | 1 | 538 | 1 | 538 | multicopper oxidase [Populus trichocarpa] |
RefSeq | XP_002522337.1 | 0 | 23 | 538 | 24 | 539 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 29 | 531 | 4 | 539 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1asq_A | 0 | 29 | 531 | 4 | 539 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1asp_B | 0 | 29 | 531 | 4 | 539 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1asp_A | 0 | 29 | 531 | 4 | 539 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1aso_B | 0 | 29 | 531 | 4 | 539 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |