| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.007G089400.2 |
| Family | GH5 |
| Protein Properties | Length: 494 Molecular Weight: 55793.4 Isoelectric Point: 4.8669 |
| Chromosome | Chromosome/Scaffold: 07 Start: 11562776 End: 11565757 |
| Description | |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 210 | 482 | 2.89999e-41 |
| LQDHWNSYITEEDFRFMSENSLNAVRIPVGWWIASDPTPPKPFVGGSLKALDNAFTWAQKYGMKVIVDLHAVQASQNGNDHSATRDGYQEWGESNIQETV AVIDFLAESRYADKPSLAAIELMNEPMAPGVNLDTLIKYYQAGYDAVRKHSENAYVILSNRLGPADSKELLSFASGLKRVVIDVHYYNLFSDSFNNMNPQ QNIDYIYNQRASALTTVTTTNGPLREWTGDWAVQGASMQDYQNFAKAQLDVYGRATFGWAYWAYKCAGDHWSL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 494 Download |
| MAYYFFILAT LFFVFSPLSL AQPFKAVNLG NWLVTEGWMK PSLYDGMPNN DLLDGAQVQF 60 LSTKLQKYLS SENGGGTVLV ANRPSASGWE TFRLWRINET YFNFRVFNKQ FVGLEDQGDK 120 VTAVSDTVGN SQTFQIIRNN DDRNRVRLQA SNGQFIQASS ETLVTADYVG SGWEDSDPSV 180 FKMTIVNIYS FRGEYQLTNG YGPDRAPQVL QDHWNSYITE EDFRFMSENS LNAVRIPVGW 240 WIASDPTPPK PFVGGSLKAL DNAFTWAQKY GMKVIVDLHA VQASQNGNDH SATRDGYQEW 300 GESNIQETVA VIDFLAESRY ADKPSLAAIE LMNEPMAPGV NLDTLIKYYQ AGYDAVRKHS 360 ENAYVILSNR LGPADSKELL SFASGLKRVV IDVHYYNLFS DSFNNMNPQQ NIDYIYNQRA 420 SALTTVTTTN GPLREWTGDW AVQGASMQDY QNFAKAQLDV YGRATFGWAY WAYKCAGDHW 480 SLKWMIENNY IKL* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00257 | Fascin | 0.006 | 102 | 168 | 67 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| pfam00150 | Cellulase | 2.0e-15 | 213 | 473 | 267 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 2.0e-25 | 174 | 358 | 188 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030674 | protein binding, bridging |
| GO:0051015 | actin filament binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN74231.1 | 0 | 23 | 493 | 142 | 607 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI18831.1 | 0 | 23 | 493 | 34 | 505 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI33033.1 | 0 | 23 | 493 | 34 | 505 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002306319.1 | 0 | 25 | 491 | 1 | 481 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002309987.1 | 0 | 39 | 493 | 1 | 455 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2pc8_A | 7e-34 | 194 | 474 | 51 | 366 | A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A |
| PDB | 1eqp_A | 2e-33 | 194 | 488 | 45 | 375 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 2pbo_A | 2e-33 | 194 | 474 | 51 | 366 | A Chain A, E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A |
| PDB | 2pb1_A | 2e-33 | 194 | 474 | 51 | 366 | A Chain A, Exo-b-(1,3)-glucanase From Candida Albicans In Complex With Unhydrolysed And Covalently Linked 2,4-dinitrophenyl-2-deoxy-2- Fluoro-b-d-glucopyranoside At 1.9 A |
| PDB | 1eqc_A | 2e-33 | 194 | 488 | 45 | 375 | A Chain A, Exo-b-(1,3)-glucanase From Candida Albicans In Complex With Unhydrolysed And Covalently Linked 2,4-dinitrophenyl-2-deoxy-2- Fluoro-b-d-glucopyranoside At 1.9 A |
