| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.007G107300.1 |
| Family | CE8 |
| Protein Properties | Length: 594 Molecular Weight: 65011.2 Isoelectric Point: 6.1955 |
| Chromosome | Chromosome/Scaffold: 07 Start: 13110889 End: 13114202 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 288 | 585 | 0 |
| KDNGCYKTVQEAVNAAPDNAMDRRFVIHIKEGVFEEIVRVPFEKKNVVFLGDGMGKSVITGSLSVGQIGVTTYESATVGVLGDGFMASGLTIQNTAGAPT HQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKSCHIEGNVDFIFGNSAAIFQDCQILIRPRQEKPEKGENNAVTAHGRTDPAQSTGFVFQNCLIN GTEEYMALYRSKPSVHKNFLGRPWKEFSRTVFIHCNLEALLTPQGWMPWSGDFALKTLYYGEFENSGPGSDSSQRVTWSSQIPAEHVATYSVQHFIQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 594 Download |
| MVEPSSPTGS TKPLNNFGHR PPFSSSKSKC FVIIIAIVLL LSLVSLILFF TLSSKTNKEH 60 RYSPQTQLFP SIPAPITTRQ TQTDIHLACN ATQHPQTCES SLGEANVVPP NPTPLQVIQS 120 AIFVSSQNLT TAKSILNSLL ASTTNPNITT AAKICLEVLG YSQYRISSAN QSLTRGEIKN 180 ARAWMSAGLS YQNDCYGGLI YNAGNSTSKP VNETLLFLES LVGLTSNALS MTVSYDLFGN 240 ETESWRPPQT ERDGFWEDSV LDSVRGFLRG GFPSKLTADA TVCKDESKDN GCYKTVQEAV 300 NAAPDNAMDR RFVIHIKEGV FEEIVRVPFE KKNVVFLGDG MGKSVITGSL SVGQIGVTTY 360 ESATVGVLGD GFMASGLTIQ NTAGAPTHQA VAFRSDSDLS IIENCEFLGN QDTLYAHSLR 420 QFYKSCHIEG NVDFIFGNSA AIFQDCQILI RPRQEKPEKG ENNAVTAHGR TDPAQSTGFV 480 FQNCLINGTE EYMALYRSKP SVHKNFLGRP WKEFSRTVFI HCNLEALLTP QGWMPWSGDF 540 ALKTLYYGEF ENSGPGSDSS QRVTWSSQIP AEHVATYSVQ HFIQGDEWIP TSS* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02745 | PLN02745 | 1.0e-112 | 85 | 593 | 536 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 2.0e-115 | 155 | 589 | 445 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 5.0e-118 | 65 | 592 | 579 | + Probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 2.0e-160 | 279 | 586 | 311 | + Pectinesterase. | ||
| PLN02708 | PLN02708 | 0 | 60 | 593 | 538 | + Probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002275218.1 | 0 | 60 | 593 | 41 | 573 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002281640.1 | 0 | 60 | 593 | 23 | 555 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002306241.1 | 0 | 85 | 593 | 53 | 558 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002309906.1 | 0 | 51 | 593 | 23 | 564 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517239.1 | 0 | 53 | 593 | 19 | 552 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 274 | 593 | 3 | 312 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 276 | 592 | 1 | 307 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 2e-20 | 277 | 591 | 3 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 2e-20 | 277 | 591 | 3 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 2e-20 | 277 | 591 | 3 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
