| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.007G107300.2 |
| Family | CE8 |
| Protein Properties | Length: 585 Molecular Weight: 63889.6 Isoelectric Point: 7.7148 |
| Chromosome | Chromosome/Scaffold: 07 Start: 13110889 End: 13115809 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 272 | 576 | 0 |
| VTVCKDTSNGGCYKTVQEAVNTAPDNEWGHRYVIHIKEGVYNEIVRVPLEKKNVVFLGDGMGKTVITGSLAVGQPGISTYNTATVGVLGDGFMASGLTIQ NTAGAPTHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKSCHIEGNVDFIFGNSAAIFQDCQILIRPRQEKPEKGENNAVTAHGRTDPAQSTGFV FQNCLINGTEEYMALYRSKPSVHKNFLGRPWKEFSRTVFIHCNLEALLTPQGWMPWSGDFALKTLYYGEFENSGPGSDSSQRVTWSSQIPAEHVATYSVQ HFIQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 585 Download |
| MTTSSTTHSR KPRNFLYISM ASLLSFSLFS LFLFLSLSSS STTTLKTNSH HPTKQKQKPR 60 PNVPPSSAST TPPEILQACK ATRFQDTCVS SLSNPNVPRN PTPLQIIQSA ISVSNTNLKT 120 AQSMVKSILD SSTGNINRTT AAKNCVEALI NSQYRITRST DDALPRGRVK DARAWMGAAL 180 LYQYDCSNAL KYANDTSLTR QTMSFLDTLM AFSSNALSMI VSYDAFGNDT KSWGPPKTER 240 DGVWELGSAP GSGGDFGSGF RGGFPSELTA DVTVCKDTSN GGCYKTVQEA VNTAPDNEWG 300 HRYVIHIKEG VYNEIVRVPL EKKNVVFLGD GMGKTVITGS LAVGQPGIST YNTATVGVLG 360 DGFMASGLTI QNTAGAPTHQ AVAFRSDSDL SIIENCEFLG NQDTLYAHSL RQFYKSCHIE 420 GNVDFIFGNS AAIFQDCQIL IRPRQEKPEK GENNAVTAHG RTDPAQSTGF VFQNCLINGT 480 EEYMALYRSK PSVHKNFLGR PWKEFSRTVF IHCNLEALLT PQGWMPWSGD FALKTLYYGE 540 FENSGPGSDS SQRVTWSSQI PAEHVATYSV QHFIQGDEWI PTSS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02713 | PLN02713 | 2.0e-111 | 62 | 583 | 563 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02745 | PLN02745 | 4.0e-112 | 53 | 584 | 554 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 3.0e-115 | 69 | 580 | 526 | + pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 6.0e-160 | 271 | 577 | 310 | + Pectinesterase. | ||
| PLN02708 | PLN02708 | 0 | 47 | 584 | 539 | + Probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF42039.1 | 0 | 73 | 582 | 73 | 575 | pectin methylesterase 2 [Pyrus communis] |
| RefSeq | XP_002281640.1 | 0 | 28 | 584 | 1 | 555 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002306241.1 | 0 | 44 | 584 | 23 | 558 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002309906.1 | 0 | 42 | 584 | 23 | 564 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517239.1 | 0 | 53 | 584 | 22 | 552 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 266 | 584 | 3 | 312 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 268 | 580 | 1 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 7e-22 | 269 | 582 | 3 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 7e-22 | 269 | 582 | 3 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 7e-22 | 269 | 582 | 3 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
