Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.007G114300.1 |
Family | GH3 |
Protein Properties | Length: 772 Molecular Weight: 84815.3 Isoelectric Point: 4.7945 |
Chromosome | Chromosome/Scaffold: 07 Start: 13587516 End: 13590840 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 99 | 355 | 0 |
GVPRLGLAEYQWWSEALHGVSNVGPGTFFDDLIPGSTSFPTVITTAAAFNESLWKVIGQAVSTEARAMYNLGRAGLTYWSPNINVVRDPRWGRAIETPGE DPYLVGRYAVNYVRGLQDVEGSENYTDPNSRPLKVSSCCKHYAAYDVDNWKGVERYTFDARVSEQDMVETFLRPFQMCVKDGDVSSVMCSYNRVNGIPTC ADPKLLNQTIRGDWDLHGYIVSDCDSLQVMVENHKWLGLDLDCGAYYTENVEAAVRQ |
Full Sequence |
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Protein Sequence Length: 772 Download |
MAKILCSFIF LCACFVLSTG ARVNHRILSS STLDHDDATP TGSNFTFVCD PARYASLGLD 60 VSNFAFCDTS LSYEVRAMDL VNQMTLNEKV LQLGNKAYGV PRLGLAEYQW WSEALHGVSN 120 VGPGTFFDDL IPGSTSFPTV ITTAAAFNES LWKVIGQAVS TEARAMYNLG RAGLTYWSPN 180 INVVRDPRWG RAIETPGEDP YLVGRYAVNY VRGLQDVEGS ENYTDPNSRP LKVSSCCKHY 240 AAYDVDNWKG VERYTFDARV SEQDMVETFL RPFQMCVKDG DVSSVMCSYN RVNGIPTCAD 300 PKLLNQTIRG DWDLHGYIVS DCDSLQVMVE NHKWLGLDLD CGAYYTENVE AAVRQGKVRE 360 ADIDKSLNFL YVVLMRLGFF DGIPQYNSFG KNDVCSKENI ELATEAAREG AVLLKNENDS 420 LPLSIEKVKT LAVIGPHSNA TSAMIGNYAG IPCQIITPIE GLSKYAKVDY QMGCSDIACK 480 DESFIFPAME SAKKADATII LAGIDLSIEA ESLDRDDLLL PGYQTQLINQ VASVSNGPVV 540 LVLMSAGGVD ISFAKSNGDI KSILWVGYPG EEGGNAIADV IFGKYNPGGR LPLTWHEADY 600 VDMLPMTSMP LRPIDSLGYP GRTYKFFNGS TVYPFGHGLS YTQFTYKLTS TIRSLDIKLD 660 KYQYCHDLGY KNDSFKPSFE VLNAGAKDGS EVVIVYAKPP EGIDATYIKQ VIGFKRVFVP 720 AGGSEKVKFE FNASKSLQVV DFNAYSVLPS GGHTIMLGDD IISFSVQIRF C* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 1.0e-46 | 111 | 475 | 384 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-55 | 95 | 366 | 289 | + Glycosyl hydrolase family 3 N terminal domain. | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-59 | 411 | 642 | 242 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 1.0e-73 | 79 | 734 | 738 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 62 | 768 | 744 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002274591.1 | 0 | 44 | 770 | 44 | 802 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274619.1 | 0 | 1 | 770 | 5 | 803 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274651.1 | 0 | 40 | 760 | 44 | 794 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309869.1 | 0 | 78 | 771 | 1 | 694 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519718.1 | 0 | 16 | 770 | 19 | 801 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 123 | 758 | 78 | 722 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3u48_A | 0 | 123 | 758 | 78 | 722 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3u4a_B | 0 | 123 | 758 | 78 | 722 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3u4a_A | 0 | 123 | 758 | 78 | 722 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 2x41_A | 1.4013e-45 | 76 | 758 | 3 | 699 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |