Basic Information | |
---|---|
Species | Populus trichocarpa |
Cazyme ID | Potri.008G007500.2 |
Family | GH47 |
Protein Properties | Length: 449 Molecular Weight: 50292.9 Isoelectric Point: 5.5176 |
Chromosome | Chromosome/Scaffold: 08 Start: 404473 End: 410117 |
Description | alpha-mannosidase 1 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH47 | 106 | 430 | 0 |
AMIHAWSSYEKYAWGHDELQPQSKKGIDSFGGLGATLIDALDTLYIMGLDEQFQRAREWVANSLDFNKDYDASVFETTIRVVGGLLSAYDLSGDKVFLEK ARDIADRLLPAWNTPTGIPYNTINLVHGNAHNPGWTGGDSILADSGTEQLEFIALSHRTGDPKYQQKAENVIAELNKTFPDDGLLPIYISPDRGIGSYST ITFGAMGDSFYEYLLKVWIQGNKTSAVRNYREMWEKSMKGLLSLVRKTTPSSFTYLCEKNGDSLSDKMDELACFAPGMLALGSSGYGPDESQKIFTLAEE LAWTCYNFYQSTPTKLAGENYFFRP |
Full Sequence |
---|
Protein Sequence Length: 449 Download |
MARVRSSSSS SKWRYCNPSY YLKRPKRLAL LFIVFVCASF FVWDRQTLVR EHEVEILKLN 60 GEVNQLKTML EGLKSGGGDD GKLISEKKDV PDEPIDVERR QKVKEAMIHA WSSYEKYAWG 120 HDELQPQSKK GIDSFGGLGA TLIDALDTLY IMGLDEQFQR AREWVANSLD FNKDYDASVF 180 ETTIRVVGGL LSAYDLSGDK VFLEKARDIA DRLLPAWNTP TGIPYNTINL VHGNAHNPGW 240 TGGDSILADS GTEQLEFIAL SHRTGDPKYQ QKAENVIAEL NKTFPDDGLL PIYISPDRGI 300 GSYSTITFGA MGDSFYEYLL KVWIQGNKTS AVRNYREMWE KSMKGLLSLV RKTTPSSFTY 360 LCEKNGDSLS DKMDELACFA PGMLALGSSG YGPDESQKIF TLAEELAWTC YNFYQSTPTK 420 LAGENYFFRP GEVSHPHCPP SMQSIISI* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1331 | COG1331 | 0.002 | 185 | 274 | 90 | + Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] | ||
PTZ00470 | PTZ00470 | 2.0e-137 | 92 | 431 | 346 | + glycoside hydrolase family 47 protein; Provisional | ||
pfam01532 | Glyco_hydro_47 | 3.0e-146 | 106 | 430 | 333 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF16414.1 | 0 | 12 | 432 | 14 | 442 | AF126550_1 mannosyl-oligosaccharide 1,2-alpha-mannosidase [Glycine max] |
EMBL | CBI18472.1 | 0 | 1 | 432 | 1 | 436 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_175570.1 | 0 | 1 | 432 | 1 | 431 | mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Arabidopsis thaliana] |
RefSeq | XP_002310939.1 | 0 | 1 | 432 | 1 | 432 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528166.1 | 0 | 62 | 432 | 13 | 389 | mannosyl-oligosaccharide alpha-1,2-mannosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1nxc_A | 0 | 93 | 431 | 11 | 354 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 1fo3_A | 0 | 94 | 431 | 4 | 342 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 1fo2_A | 0 | 94 | 431 | 4 | 342 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
PDB | 1fmi_A | 0 | 94 | 431 | 4 | 342 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1x9d_A | 0 | 94 | 431 | 82 | 420 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |