Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.008G011100.1 |
Family | CE8 |
Protein Properties | Length: 587 Molecular Weight: 65013.6 Isoelectric Point: 8.4371 |
Chromosome | Chromosome/Scaffold: 08 Start: 613426 End: 617736 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 268 | 568 | 0 |
VIVGPYGADNFTTITDAIAFAPNSSTPEDGYFVIFVREGIYEEYVVVPKNKKNIMMIGEGINRTIITGNHSVMDGWTTFNSSTFAVSGERFVGVYITFRN TAGPQKHQAVALRNNADLSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNLYARKPMLNQKNAFTAQGRTDPNQNTGISIQNCT IEAAPDLAMDKNSTGSNSTSNFLGRPWKVYSRTVIMQSYIGELIQPAGWLEWNGTVGLDTIYYGEFQNYGPGSNTSRRVKWPGYNLMNATQAANFTVYNL T |
Full Sequence |
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Protein Sequence Length: 587 Download |
MQHPPFLFLF LAFLSIFSPL LISSQSPPPP PPVPPPPPPV APQSPSDACK STLYPKLCRS 60 ILTTFPSSSS NPYEYSKFSV KQCHKQAKRL SKVINYHLTH KNQRSKMTHE EFGALQDCHE 120 LMELNVDYFE TISSELKSAE SMNDVLVERV KSLLSGVVTN QQSCYDGLVQ SKSSIASALS 180 VPLSNGTRLY SVSLALVTHS LEKNLKKNKG RKGSHHHGIL TKGVREPLET LIKALKRTAS 240 CHKSSNCHRG ERILSDDSGD GILLNDSVIV GPYGADNFTT ITDAIAFAPN SSTPEDGYFV 300 IFVREGIYEE YVVVPKNKKN IMMIGEGINR TIITGNHSVM DGWTTFNSST FAVSGERFVG 360 VYITFRNTAG PQKHQAVALR NNADLSTFYR CSFEGYQDTL YVHSLRQFYR ECDIYGTVDF 420 IFGNAAAVFQ NCNLYARKPM LNQKNAFTAQ GRTDPNQNTG ISIQNCTIEA APDLAMDKNS 480 TGSNSTSNFL GRPWKVYSRT VIMQSYIGEL IQPAGWLEWN GTVGLDTIYY GEFQNYGPGS 540 NTSRRVKWPG YNLMNATQAA NFTVYNLTTG DTWLPFTDIP FSGGLL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02416 | PLN02416 | 7.0e-151 | 49 | 585 | 539 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 5.0e-151 | 114 | 585 | 477 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN03043 | PLN03043 | 0 | 47 | 586 | 543 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
PLN02713 | PLN02713 | 0 | 48 | 586 | 546 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 268 | 571 | 305 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI29156.1 | 0 | 42 | 586 | 29 | 567 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002273427.1 | 0 | 42 | 586 | 29 | 571 | PREDICTED: similar to pectinesterase, putative [Vitis vinifera] |
RefSeq | XP_002310960.1 | 0 | 44 | 586 | 1 | 543 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315399.1 | 0 | 47 | 586 | 36 | 574 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515774.1 | 0 | 48 | 586 | 35 | 568 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 268 | 585 | 9 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 269 | 585 | 6 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 3e-26 | 278 | 575 | 18 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 3e-26 | 278 | 575 | 18 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 3e-26 | 278 | 575 | 18 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |