Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.008G011200.1 |
Family | CE8 |
Protein Properties | Length: 569 Molecular Weight: 62582.5 Isoelectric Point: 9.4178 |
Chromosome | Chromosome/Scaffold: 08 Start: 617871 End: 619750 |
Description | root hair specific 12 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 263 | 553 | 0 |
AIVAQDGSGKYKRITDALKDVPEKSEKRYVIYVKKGIYFENVRIEKNQWNVMMIGDGMNATIVSASLNVVDGTPTFSTATFAVFGKGFIARDMGFRNTAG AIKHQAVALMSNADMSAFYRCSMDAFQDTLYTHANRQFYRECNIYGTVDFIFGNSAVVIQNSNILPRKPMEGQQNTITAQGRIDPNQNTGISIQNCTILP FGDLSSVKTYLGRPWKNYSTTVFMRSMMGSLIDPAGWLPWIGDTAPPTIFYTEFENFGPGASTKNRVKWKGLKTITNKQASKFTVKAFIQG |
Full Sequence |
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Protein Sequence Length: 569 Download |
MSSLKAYGKL DEAEQARLEA RRRTRKRITI ISLSSILLVA IVVAAVVGTR AASGNSKKGG 60 ADKSISTSVK AVCDVTLYKD SCYNNLAPVA KPDQLQPEEL FKLAIQVAKN ELSKASQHFS 120 KDGGVLYNGV KDNMTITALE NCQELLSLAL DHLDNSLEAG HGVSVIDIVD DLRTWLSTSG 180 TCYQTCIDGL SETKLKATAN DYLKSSSELT SNSLAIITWI SKVASSVNIH RRLLNYEDQE 240 MPKWLHPEAR KLLQSSDLNK ADAIVAQDGS GKYKRITDAL KDVPEKSEKR YVIYVKKGIY 300 FENVRIEKNQ WNVMMIGDGM NATIVSASLN VVDGTPTFST ATFAVFGKGF IARDMGFRNT 360 AGAIKHQAVA LMSNADMSAF YRCSMDAFQD TLYTHANRQF YRECNIYGTV DFIFGNSAVV 420 IQNSNILPRK PMEGQQNTIT AQGRIDPNQN TGISIQNCTI LPFGDLSSVK TYLGRPWKNY 480 STTVFMRSMM GSLIDPAGWL PWIGDTAPPT IFYTEFENFG PGASTKNRVK WKGLKTITNK 540 QASKFTVKAF IQGEGWLKGT GISYKPGL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 4.0e-167 | 128 | 568 | 447 | + pectinesterase/pectinesterase inhibitor | ||
PLN02745 | PLN02745 | 9.0e-168 | 54 | 568 | 542 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02468 | PLN02468 | 0 | 4 | 568 | 567 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 0 | 3 | 564 | 583 | + pectinesterase | ||
pfam01095 | Pectinesterase | 0 | 262 | 554 | 298 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI29155.1 | 0 | 1 | 568 | 1 | 561 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002273396.1 | 0 | 1 | 568 | 4 | 564 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311918.1 | 0 | 1 | 568 | 1 | 568 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002316458.1 | 0 | 1 | 568 | 1 | 569 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515781.1 | 0 | 1 | 568 | 1 | 573 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 261 | 568 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 262 | 568 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 1e-20 | 262 | 546 | 5 | 329 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 1e-20 | 262 | 546 | 5 | 329 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 1e-20 | 262 | 546 | 5 | 329 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |