Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.008G013500.1 |
Family | GH3 |
Protein Properties | Length: 663 Molecular Weight: 72158.4 Isoelectric Point: 6.8325 |
Chromosome | Chromosome/Scaffold: 08 Start: 729850 End: 736199 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 110 | 343 | 0 |
SSRLGIPMIYGIDAVHGHNNVFNATIFPHNIGLGATRDPDLVKRIGSATALEVRATGIPYVFAPCIAVCKDPRWGRCYESYSEDHKVVQAMTEIIPGLQG DIPVNSRKGVPYVGGKKKVAACAKHFVGDGGTTKGINENNTVIDKHGLLSIHMPAYSDSIIKGVSTIMVSYSSWNGEKMHANRELITGFLKNTLKFKGFV ISDWQGIDRITSPPRANYSYSVQAAIQAGIDMVM |
Full Sequence |
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Protein Sequence Length: 663 Download |
MEAMARILMK MMGIMLWLMV LIEMAVGEDV KYKDPKQPVA VRIKDLMSRM TLEEKIGQMV 60 QIDRLTASPD IMQTYCIGSV LSGGGSAPLP NASAEDWVNM INGFQHGSLS SRLGIPMIYG 120 IDAVHGHNNV FNATIFPHNI GLGATRDPDL VKRIGSATAL EVRATGIPYV FAPCIAVCKD 180 PRWGRCYESY SEDHKVVQAM TEIIPGLQGD IPVNSRKGVP YVGGKKKVAA CAKHFVGDGG 240 TTKGINENNT VIDKHGLLSI HMPAYSDSII KGVSTIMVSY SSWNGEKMHA NRELITGFLK 300 NTLKFKGFVI SDWQGIDRIT SPPRANYSYS VQAAIQAGID MVMLPFNHTE FIDDLTYLVK 360 TNVIPVDRID DAVGRILLVK FTLGLFENPL ADLSLVNELG SQAHRDLARE AVRKSLVLLK 420 NGKNETDPLL PLPRKVSKIL VAGTHADNLG YQCGGWTIQW QGFSGNGYTR GTTILGAIKS 480 TVDPSTEVVF QENPDSKFIK DNNFAYAIIV VGEAPYAETA GDSMDLTMID PGPSVISNVC 540 ETVKCVVVVI SGRPIVIEPY LSSIDALVAA WLPGTEGQGV ADALFGDYGF TGKLPRTWFK 600 NVDQLPMNVG DPHYDPLFPF DFGLKTKSAP DIVRRSTSAG IIGRPYALFL MVSVIFSLCF 660 IG* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 8.0e-29 | 38 | 608 | 630 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 5.0e-42 | 416 | 624 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 3.0e-69 | 43 | 624 | 644 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 7.0e-78 | 50 | 484 | 442 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-83 | 51 | 377 | 331 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI24995.1 | 0 | 50 | 662 | 1 | 615 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_680141.2 | 0 | 4 | 661 | 1 | 657 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002262992.1 | 0 | 28 | 662 | 24 | 654 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002266675.1 | 0 | 4 | 627 | 1 | 623 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002514453.1 | 0 | 4 | 652 | 1 | 646 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 30 | 628 | 3 | 601 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |
PDB | 1iex_A | 0 | 30 | 628 | 3 | 601 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |
PDB | 1iew_A | 0 | 30 | 628 | 3 | 601 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |
PDB | 1iev_A | 0 | 30 | 628 | 3 | 601 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |
PDB | 1ieq_A | 0 | 30 | 628 | 3 | 601 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |