Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.008G013700.1 |
Family | GH3 |
Protein Properties | Length: 622 Molecular Weight: 68114.9 Isoelectric Point: 9.7834 |
Chromosome | Chromosome/Scaffold: 08 Start: 740327 End: 743130 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 107 | 341 | 0 |
STRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGVTRDPALVKKIGAATALEVRATGIPYAFAPCIAVCRDPRWGRCYESYSEDHKIVQMMTEIIPGLQG DVPANFQRGTPFVSGKDKVAACAKHFVGDGGTVKGINENNTIVTHNELYSIHMPAYLNSLDKGVATVMVSYSSINGLKMHANRGLVTGFLKRKLKFRGFV ISDWEGIDRITYPPHKNYSYSILKSVNAGVDMVMV |
Full Sequence |
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Protein Sequence Length: 622 Download |
MAKAWIALVG LLFICCWSST MGAEEHVLYK DPTKPVDKRV KDLLKRMTLE EKIGQMVQLE 60 RTNMTAEIMR KYYIGSLLSG GGSVPADRAS PKQWVDMVNT FQKGSLSTRL GIPMIYGIDA 120 VHGHNNVYKA TIFPHNVGLG VTRDPALVKK IGAATALEVR ATGIPYAFAP CIAVCRDPRW 180 GRCYESYSED HKIVQMMTEI IPGLQGDVPA NFQRGTPFVS GKDKVAACAK HFVGDGGTVK 240 GINENNTIVT HNELYSIHMP AYLNSLDKGV ATVMVSYSSI NGLKMHANRG LVTGFLKRKL 300 KFRGFVISDW EGIDRITYPP HKNYSYSILK SVNAGVDMVM VPYNYTEFIN GLTDLVNKKA 360 IRIQRIDDAV RRILRVKFAM GLFENPLADY SFVDKLGSKE HRELAREAVR KSLVLLKNGK 420 SAKSPVVPLP KKASKILVAG THADNLGNQC GGWTIKWQGQ EGNNLTAGIQ AAVDPSTKVV 480 FKENPNAKYV KSQGFSHAIV VVGEPPYAET AGDNLNLTLP NPGPKIINNV CGAVKCVVVI 540 VSGRPLVIES YVPKIDALVA AWLPGSEGQG VADVLFGDYG FTGKLARTWF KRVDQLPMNV 600 GDKHYDPLFP FGFGLETKPS N* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 2.0e-33 | 31 | 607 | 619 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-40 | 413 | 615 | 221 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 5.0e-79 | 5 | 615 | 678 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 5.0e-86 | 47 | 455 | 416 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 4.0e-88 | 48 | 376 | 333 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAR14129.1 | 0 | 11 | 619 | 10 | 622 | exo-beta-glucanase [Lilium longiflorum] |
GenBank | ABK95015.1 | 0 | 1 | 620 | 1 | 623 | unknown [Populus trichocarpa] |
EMBL | CAA07070.1 | 0 | 1 | 621 | 1 | 627 | beta-D-glucosidase [Tropaeolum majus] |
RefSeq | XP_002266470.1 | 0 | 25 | 620 | 24 | 625 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311926.1 | 0 | 1 | 621 | 1 | 634 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 25 | 620 | 1 | 602 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
PDB | 1x38_A | 0 | 25 | 620 | 1 | 602 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
PDB | 1lq2_A | 0 | 25 | 620 | 1 | 602 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 25 | 620 | 1 | 602 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 25 | 620 | 1 | 602 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |