Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.008G064000.1 |
Family | AA1 |
Protein Properties | Length: 557 Molecular Weight: 60948.9 Isoelectric Point: 7.6428 |
Chromosome | Chromosome/Scaffold: 08 Start: 3873859 End: 3877490 |
Description | Laccase/Diphenol oxidase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 23 | 543 | 0 |
CEVRLYDFRVVLTNTTKLCSTKSIVTINGKFPGPTIYAREGDNVNIKLTNHVQYNVTIHWHGVRQLRTGWSDGPAYITQCPIRPGQSYLYNFTLTGQRGT LLWHAHISWLRATIHGAIVILPQKGVPYPFPKPDKEKIIILGEWWKADVEAVVNQATQTGLPPNISDAHIVNGQTGAVPGCPSPGFTLHVESGKTYLLRI INAALNDELFFKIAGHNITVVEVDAAYTKPFSTDTIFIGPGQTTNALLTADKSVGKYLMAVSPFMDTVVAVDNVTAIAFLRYKGTIAFSPPVLTTTPAIN ATPVTSTFMDNLRSLNSKKFPANVPLTVDHSLYFTIGVGIDPCATCVNGSKAVGAINNISFIMPTTALLQAHYYSISGVFTDDFPAMPPNSFNYTGNNTA LNLQTINGTRTYRLAFNSTVQLVLQGTTIIAPESHPFHLHGFNFFVVGKGFGNFDADNDPKKFNLADPVERNTISVPTAGWAAIRFRADNPGVWFLHCHL EVHTTWGLKMVFVVDNGEGPD |
Full Sequence |
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Protein Sequence Length: 557 Download |
MENYRARAIL LLVIFIFPAL VECEVRLYDF RVVLTNTTKL CSTKSIVTIN GKFPGPTIYA 60 REGDNVNIKL TNHVQYNVTI HWHGVRQLRT GWSDGPAYIT QCPIRPGQSY LYNFTLTGQR 120 GTLLWHAHIS WLRATIHGAI VILPQKGVPY PFPKPDKEKI IILGEWWKAD VEAVVNQATQ 180 TGLPPNISDA HIVNGQTGAV PGCPSPGFTL HVESGKTYLL RIINAALNDE LFFKIAGHNI 240 TVVEVDAAYT KPFSTDTIFI GPGQTTNALL TADKSVGKYL MAVSPFMDTV VAVDNVTAIA 300 FLRYKGTIAF SPPVLTTTPA INATPVTSTF MDNLRSLNSK KFPANVPLTV DHSLYFTIGV 360 GIDPCATCVN GSKAVGAINN ISFIMPTTAL LQAHYYSISG VFTDDFPAMP PNSFNYTGNN 420 TALNLQTING TRTYRLAFNS TVQLVLQGTT IIAPESHPFH LHGFNFFVVG KGFGNFDADN 480 DPKKFNLADP VERNTISVPT AGWAAIRFRA DNPGVWFLHC HLEVHTTWGL KMVFVVDNGE 540 GPDESLLPPP SDLPNC* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
TIGR03390 | ascorbOXfungal | 2.0e-51 | 28 | 538 | 550 | + L-ascorbate oxidase, fungal type. This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. |
PLN02191 | PLN02191 | 2.0e-64 | 10 | 535 | 564 | + L-ascorbate oxidase |
PLN02604 | PLN02604 | 1.0e-87 | 10 | 534 | 559 | + oxidoreductase |
TIGR03388 | ascorbase | 9.0e-94 | 25 | 534 | 558 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
TIGR03389 | laccase | 0 | 23 | 538 | 521 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAA74103.1 | 0 | 1 | 556 | 1 | 555 | laccase [Populus trichocarpa] |
EMBL | CAC14719.1 | 0 | 1 | 556 | 1 | 555 | laccase [Populus trichocarpa] |
RefSeq | XP_002311202.1 | 0 | 1 | 556 | 1 | 556 | laccase [Populus trichocarpa] |
RefSeq | XP_002316233.1 | 0 | 1 | 556 | 1 | 555 | laccase 3 [Populus trichocarpa] |
RefSeq | XP_002530417.1 | 0 | 1 | 556 | 1 | 554 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 24 | 535 | 2 | 522 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1asq_A | 0 | 24 | 535 | 2 | 522 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1asp_B | 0 | 24 | 535 | 2 | 522 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |