Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.008G073700.1 |
Family | AA1 |
Protein Properties | Length: 575 Molecular Weight: 63889.3 Isoelectric Point: 9.4172 |
Chromosome | Chromosome/Scaffold: 08 Start: 4585868 End: 4588786 |
Description | laccase 5 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 30 | 557 | 0 |
AKTHHHDFTVQATKVKRLCKTHNSITVNGMFPGPTLEVKNGDTLVVKVVNRARYNVTIHWHGIRQMRTGWADGPEFVTQCPIRPGGSYTYRFTIEGQEGT LWWHAHSSWLRATVYGALIIHPREGSSYPFSKPKRETPILLGEWWDTNPIDVVREATRTGAAPNISDAYTINGQPGDLFNCSSKDTTIVPIDSGETNLLR VINAALNQPLFFTIANHKFTVVGADASYLKPFTTSVIMLGPGQTTDVLISGDQLPGRYYMAARAYQSAQNAPFDNTTTTAILEYKSVLCPAKCTKKPFMP PLPAYNDTATVTAFSRSFRSPRKVEVPTDIDENLFFTIGLGLNNCPKNFRARRCQGPNGTRFTASMNNVSFVFPSKASLLQAYKQKIPGVFTTDFPAKPQ VKFDYTGNVSRSLFQPARGTKLYKLKYGSRVQIVLQDTSIVTPENHPIHLHGYDFYIIAEGFGNFNPKTDKSKFNLVDPPMRNTVAVPVNGWAVIRFVAD NPGVWLMHCHLDVHITWGLAMAFLVEEG |
Full Sequence |
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Protein Sequence Length: 575 Download |
MEVINRIFAN RHCSFFLLLL LASAMSLAIA KTHHHDFTVQ ATKVKRLCKT HNSITVNGMF 60 PGPTLEVKNG DTLVVKVVNR ARYNVTIHWH GIRQMRTGWA DGPEFVTQCP IRPGGSYTYR 120 FTIEGQEGTL WWHAHSSWLR ATVYGALIIH PREGSSYPFS KPKRETPILL GEWWDTNPID 180 VVREATRTGA APNISDAYTI NGQPGDLFNC SSKDTTIVPI DSGETNLLRV INAALNQPLF 240 FTIANHKFTV VGADASYLKP FTTSVIMLGP GQTTDVLISG DQLPGRYYMA ARAYQSAQNA 300 PFDNTTTTAI LEYKSVLCPA KCTKKPFMPP LPAYNDTATV TAFSRSFRSP RKVEVPTDID 360 ENLFFTIGLG LNNCPKNFRA RRCQGPNGTR FTASMNNVSF VFPSKASLLQ AYKQKIPGVF 420 TTDFPAKPQV KFDYTGNVSR SLFQPARGTK LYKLKYGSRV QIVLQDTSIV TPENHPIHLH 480 GYDFYIIAEG FGNFNPKTDK SKFNLVDPPM RNTVAVPVNG WAVIRFVADN PGVWLMHCHL 540 DVHITWGLAM AFLVEEGIGI LQSVEPPPAD LPIC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 1.0e-56 | 38 | 154 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 4.0e-72 | 48 | 558 | 543 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 1.0e-80 | 30 | 558 | 560 | + oxidoreductase | ||
TIGR03388 | ascorbase | 1.0e-93 | 32 | 558 | 571 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 30 | 574 | 550 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92474.1 | 0 | 25 | 574 | 1 | 550 | unknown [Populus trichocarpa] |
EMBL | CAA74104.1 | 0 | 1 | 574 | 1 | 574 | laccase [Populus trichocarpa] |
RefSeq | XP_002312186.1 | 0 | 1 | 574 | 1 | 574 | laccase 90a [Populus trichocarpa] |
RefSeq | XP_002315131.1 | 0 | 1 | 574 | 1 | 575 | laccase 90c [Populus trichocarpa] |
RefSeq | XP_002520796.1 | 0 | 2 | 574 | 3 | 577 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 30 | 558 | 1 | 525 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 1asq_A | 0 | 30 | 558 | 1 | 525 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 1asp_B | 0 | 30 | 558 | 1 | 525 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 1asp_A | 0 | 30 | 558 | 1 | 525 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 1aso_B | 0 | 30 | 558 | 1 | 525 | A Chain A, Raphanus Sativus Anionic Peroxidase. |