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Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.008G073800.1 |
Family | AA1 |
Protein Properties | Length: 583 Molecular Weight: 63906.3 Isoelectric Point: 7.1065 |
Chromosome | Chromosome/Scaffold: 08 Start: 4592477 End: 4595835 |
Description | laccase 12 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 34 | 568 | 0 |
AETHNHDFVIQATPVKRLCKTQNSITVNGMFPGPTLEVNNGDTLVVNVVNKAQYNVTIHWHGVRQMRTGWADGPEFVTQCPIRPGGSYTYKFTIQGQEGT LWWHAHSSWLRATVYGALIVHPKEGSPYPFSKQPKRETAILLGEWWNANPIDVVREATRTGGAPNVSDAYTVNGQPGDLYNCSSQDTVIVPIDSGETNLL RVVNSALNQPLFFTVANHKFTVVGADASYVKPFTTSVLMLGPGQTTDVLISGDQTPSRYYMAARAYQSAQNAPFDNTTTTAILEYKSSACAAKNCSSNKP IMPPLPAYNDTATVTTFTTSFKSADKTLVPTDIDESLFFTIGLGLNPCPSNFNKSSQCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHQRIQGVFTTDFP ANPPRKFDYTGNVSRSLFQPVAGTKLYNLKYGSRVQIVLQDTSIVTPENHPIHLHGYDFYIIAQGFGNYNPRADPSKFNLVDPPLRNTVAVPVNGWAVIR FVADNPGVWLMHCHLDVHITWGLATAFLVENGVGQ |
Full Sequence |
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Protein Sequence Length: 583 Download |
MEGFDNIFAI NHRLSLFFLG LLLLLASALS LANAETHNHD FVIQATPVKR LCKTQNSITV 60 NGMFPGPTLE VNNGDTLVVN VVNKAQYNVT IHWHGVRQMR TGWADGPEFV TQCPIRPGGS 120 YTYKFTIQGQ EGTLWWHAHS SWLRATVYGA LIVHPKEGSP YPFSKQPKRE TAILLGEWWN 180 ANPIDVVREA TRTGGAPNVS DAYTVNGQPG DLYNCSSQDT VIVPIDSGET NLLRVVNSAL 240 NQPLFFTVAN HKFTVVGADA SYVKPFTTSV LMLGPGQTTD VLISGDQTPS RYYMAARAYQ 300 SAQNAPFDNT TTTAILEYKS SACAAKNCSS NKPIMPPLPA YNDTATVTTF TTSFKSADKT 360 LVPTDIDESL FFTIGLGLNP CPSNFNKSSQ CQGPNGTRFT ASMNNVSFVL PSNFSLLQAH 420 HQRIQGVFTT DFPANPPRKF DYTGNVSRSL FQPVAGTKLY NLKYGSRVQI VLQDTSIVTP 480 ENHPIHLHGY DFYIIAQGFG NYNPRADPSK FNLVDPPLRN TVAVPVNGWA VIRFVADNPG 540 VWLMHCHLDV HITWGLATAF LVENGVGQLQ SIESPPEDLP LC* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 1.0e-54 | 42 | 158 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 8.0e-66 | 52 | 560 | 542 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 4.0e-79 | 52 | 574 | 554 | + oxidoreductase | ||
TIGR03388 | ascorbase | 2.0e-89 | 52 | 579 | 554 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 34 | 582 | 554 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92474.1 | 0 | 29 | 582 | 1 | 550 | unknown [Populus trichocarpa] |
RefSeq | XP_002312187.1 | 0 | 33 | 582 | 13 | 562 | laccase 90b [Populus trichocarpa] |
RefSeq | XP_002315130.1 | 0 | 1 | 582 | 1 | 582 | laccase 90d [Populus trichocarpa] |
RefSeq | XP_002315131.1 | 0 | 1 | 582 | 1 | 575 | laccase 90c [Populus trichocarpa] |
RefSeq | XP_002520797.1 | 0 | 1 | 582 | 1 | 581 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 52 | 560 | 19 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1asq_A | 0 | 52 | 560 | 19 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1asp_B | 0 | 52 | 560 | 19 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1asp_A | 0 | 52 | 560 | 19 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1aso_B | 0 | 52 | 560 | 19 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |