Basic Information | |
---|---|
Species | Populus trichocarpa |
Cazyme ID | Potri.008G073800.2 |
Family | AA1 |
Protein Properties | Length: 544 Molecular Weight: 59596.3 Isoelectric Point: 7.5719 |
Chromosome | Chromosome/Scaffold: 08 Start: 4592524 End: 4595787 |
Description | laccase 12 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA1 | 4 | 529 | 0 |
IQATPVKRLCKTQNSITVNGMFPGPTLEVNNGDTLVVNVVNKAQYNVTIHWHGVRQMRTGWADGPEFVTQCPIRPGGSYTYKFTIQGQEGTLWWHAHSSW LRATVYGALIVHPKEGSPYPFSKQPKRETAILLGEWWNANPIDVVREATRTGGAPNVSDAYTVNGQPGDLYNCSSQDTVIVPIDSGETNLLRVVNSALNQ PLFFTVANHKFTVVGADASYVKPFTTSVLMLGPGQTTDVLISGDQTPSRYYMAARAYQSAQNAPFDNTTTTAILEYKSSACAAKNCSSNKPIMPPLPAYN DTATVTTFTTSFKSADKTLVPTDIDESLFFTIGLGLNPCPSNFNKSSQCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHQRIQGVFTTDFPANPPRKFDY TGNVSRSLFQPVAGTKLYNLKYGSRVQIVLQDTSIVTPENHPIHLHGYDFYIIAQGFGNYNPRADPSKFNLVDPPLRNTVAVPVNGWAVIRFVADNPGVW LMHCHLDVHITWGLATAFLVENGVGQ |
Full Sequence |
---|
Protein Sequence Length: 544 Download |
MVQIQATPVK RLCKTQNSIT VNGMFPGPTL EVNNGDTLVV NVVNKAQYNV TIHWHGVRQM 60 RTGWADGPEF VTQCPIRPGG SYTYKFTIQG QEGTLWWHAH SSWLRATVYG ALIVHPKEGS 120 PYPFSKQPKR ETAILLGEWW NANPIDVVRE ATRTGGAPNV SDAYTVNGQP GDLYNCSSQD 180 TVIVPIDSGE TNLLRVVNSA LNQPLFFTVA NHKFTVVGAD ASYVKPFTTS VLMLGPGQTT 240 DVLISGDQTP SRYYMAARAY QSAQNAPFDN TTTTAILEYK SSACAAKNCS SNKPIMPPLP 300 AYNDTATVTT FTTSFKSADK TLVPTDIDES LFFTIGLGLN PCPSNFNKSS QCQGPNGTRF 360 TASMNNVSFV LPSNFSLLQA HHQRIQGVFT TDFPANPPRK FDYTGNVSRS LFQPVAGTKL 420 YNLKYGSRVQ IVLQDTSIVT PENHPIHLHG YDFYIIAQGF GNYNPRADPS KFNLVDPPLR 480 NTVAVPVNGW AVIRFVADNP GVWLMHCHLD VHITWGLATA FLVENGVGQL QSIESPPEDL 540 PLC* |
Functional Domains Download unfiltered results here | ||||||
---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
pfam07732 | Cu-oxidase_3 | 5.0e-55 | 3 | 119 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. |
PLN02191 | PLN02191 | 5.0e-66 | 13 | 521 | 542 | + L-ascorbate oxidase |
PLN02604 | PLN02604 | 1.0e-79 | 13 | 535 | 554 | + oxidoreductase |
TIGR03388 | ascorbase | 5.0e-90 | 13 | 540 | 554 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
TIGR03389 | laccase | 0 | 4 | 543 | 545 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92474.1 | 0 | 4 | 543 | 15 | 550 | unknown [Populus trichocarpa] |
RefSeq | XP_002312186.1 | 0 | 4 | 543 | 39 | 574 | laccase 90a [Populus trichocarpa] |
RefSeq | XP_002312187.1 | 0 | 4 | 543 | 23 | 562 | laccase 90b [Populus trichocarpa] |
RefSeq | XP_002315130.1 | 0 | 4 | 543 | 43 | 582 | laccase 90d [Populus trichocarpa] |
RefSeq | XP_002520797.1 | 0 | 4 | 543 | 43 | 581 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 13 | 521 | 19 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1asq_A | 0 | 13 | 521 | 19 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1asp_B | 0 | 13 | 521 | 19 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1asp_A | 0 | 13 | 521 | 19 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1aso_B | 0 | 13 | 521 | 19 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO797675 | 505 | 42 | 544 | 0 |
DY297248 | 343 | 181 | 522 | 0 |
DV465023 | 240 | 4 | 243 | 0 |
EX658195 | 271 | 4 | 274 | 0 |
EX274037 | 311 | 215 | 525 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|