Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.008G073800.3 |
Family | AA1 |
Protein Properties | Length: 521 Molecular Weight: 57084.4 Isoelectric Point: 7.0172 |
Chromosome | Chromosome/Scaffold: 08 Start: 4592524 End: 4595787 |
Description | laccase 12 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 1 | 506 | 0 |
MFPGPTLEVNNGDTLVVNVVNKAQYNVTIHWHGVRQMRTGWADGPEFVTQCPIRPGGSYTYKFTIQGQEGTLWWHAHSSWLRATVYGALIVHPKEGSPYP FSKQPKRETAILLGEWWNANPIDVVREATRTGGAPNVSDAYTVNGQPGDLYNCSSQDTVIVPIDSGETNLLRVVNSALNQPLFFTVANHKFTVVGADASY VKPFTTSVLMLGPGQTTDVLISGDQTPSRYYMAARAYQSAQNAPFDNTTTTAILEYKSSACAAKNCSSNKPIMPPLPAYNDTATVTTFTTSFKSADKTLV PTDIDESLFFTIGLGLNPCPSNFNKSSQCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHQRIQGVFTTDFPANPPRKFDYTGNVSRSLFQPVAGTKLYNL KYGSRVQIVLQDTSIVTPENHPIHLHGYDFYIIAQGFGNYNPRADPSKFNLVDPPLRNTVAVPVNGWAVIRFVADNPGVWLMHCHLDVHITWGLATAFLV ENGVGQ |
Full Sequence |
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Protein Sequence Length: 521 Download |
MFPGPTLEVN NGDTLVVNVV NKAQYNVTIH WHGVRQMRTG WADGPEFVTQ CPIRPGGSYT 60 YKFTIQGQEG TLWWHAHSSW LRATVYGALI VHPKEGSPYP FSKQPKRETA ILLGEWWNAN 120 PIDVVREATR TGGAPNVSDA YTVNGQPGDL YNCSSQDTVI VPIDSGETNL LRVVNSALNQ 180 PLFFTVANHK FTVVGADASY VKPFTTSVLM LGPGQTTDVL ISGDQTPSRY YMAARAYQSA 240 QNAPFDNTTT TAILEYKSSA CAAKNCSSNK PIMPPLPAYN DTATVTTFTT SFKSADKTLV 300 PTDIDESLFF TIGLGLNPCP SNFNKSSQCQ GPNGTRFTAS MNNVSFVLPS NFSLLQAHHQ 360 RIQGVFTTDF PANPPRKFDY TGNVSRSLFQ PVAGTKLYNL KYGSRVQIVL QDTSIVTPEN 420 HPIHLHGYDF YIIAQGFGNY NPRADPSKFN LVDPPLRNTV AVPVNGWAVI RFVADNPGVW 480 LMHCHLDVHI TWGLATAFLV ENGVGQLQSI ESPPEDLPLC * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 6.0e-47 | 1 | 96 | 98 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 2.0e-62 | 2 | 498 | 530 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 5.0e-76 | 2 | 512 | 542 | + oxidoreductase | ||
TIGR03388 | ascorbase | 1.0e-85 | 2 | 517 | 542 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 1 | 520 | 525 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92474.1 | 0 | 1 | 520 | 35 | 550 | unknown [Populus trichocarpa] |
RefSeq | XP_002312186.1 | 0 | 1 | 520 | 59 | 574 | laccase 90a [Populus trichocarpa] |
RefSeq | XP_002312187.1 | 0 | 1 | 520 | 43 | 562 | laccase 90b [Populus trichocarpa] |
RefSeq | XP_002315130.1 | 0 | 1 | 520 | 63 | 582 | laccase 90d [Populus trichocarpa] |
RefSeq | XP_002520797.1 | 0 | 1 | 520 | 63 | 581 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 2 | 498 | 31 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1asq_A | 0 | 2 | 498 | 31 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1asp_B | 0 | 2 | 498 | 31 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1asp_A | 0 | 2 | 498 | 31 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1aso_B | 0 | 2 | 498 | 31 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO797675 | 505 | 19 | 521 | 0 |
DY297248 | 343 | 158 | 499 | 0 |
EX274037 | 311 | 192 | 502 | 0 |
DV465023 | 220 | 1 | 220 | 0 |
CV227702 | 231 | 291 | 521 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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