Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.008G079500.1 |
Family | GH9 |
Protein Properties | Length: 621 Molecular Weight: 69472.6 Isoelectric Point: 8.7562 |
Chromosome | Chromosome/Scaffold: 08 Start: 4948112 End: 4952189 |
Description | Six-hairpin glycosidases superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 111 | 585 | 0 |
NYTLALRKALLFFNAQKSGKLHKNNGIPWRGDSGLQDGNGTDFSKAGLVGGYYDAGDNTKFHFPMAFAMTMLSWSVIEYRQKYEAIGEYQHTRDLIRWGT DYLLLTFNSSASKIDKIYCQVGGSRNGSILPDDHYCWQRPEDMDYPRPTQVVNSGADLAGEMAAALAAASIVFRDNEAYSKKLVRGAVTVYDFARDGGRR GAYSSGNDYIQPYYNSTGYYDEYIWGATWLYYATGNITYIKLATEPGFSKHSKALLSIPDLSVLSWDNKLPAAMLLLTRYRIFLNPGYPYEEMLHMYHQK TELNMCSYFQQFDVFNWTKGGMIQLNHGTPQPLQYVANAAFLASLYVDYLNATRVPGLNCGPKFISLDLLRSFATSQINYILGDNPMKMSYVVGYGTKFP RHVHHRGASTPSDKTRYSCTGGWKWRDSSKPNPHNITGAMVGGPDRFDQFRDVRTNYNFTEPTLAGNAGLVAALA |
Full Sequence |
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Protein Sequence Length: 621 Download |
MHSANHWGGS LEIYNGAEST TDDEKSRNME WDKAALQPQH HHLDETQQSW LLYPQETKKK 60 KHVDLGCVAC SHKALKWTLY AFVFALLVIA LPIILVKTLP KHNSKPPPPD NYTLALRKAL 120 LFFNAQKSGK LHKNNGIPWR GDSGLQDGNG TDFSKAGLVG GYYDAGDNTK FHFPMAFAMT 180 MLSWSVIEYR QKYEAIGEYQ HTRDLIRWGT DYLLLTFNSS ASKIDKIYCQ VGGSRNGSIL 240 PDDHYCWQRP EDMDYPRPTQ VVNSGADLAG EMAAALAAAS IVFRDNEAYS KKLVRGAVTV 300 YDFARDGGRR GAYSSGNDYI QPYYNSTGYY DEYIWGATWL YYATGNITYI KLATEPGFSK 360 HSKALLSIPD LSVLSWDNKL PAAMLLLTRY RIFLNPGYPY EEMLHMYHQK TELNMCSYFQ 420 QFDVFNWTKG GMIQLNHGTP QPLQYVANAA FLASLYVDYL NATRVPGLNC GPKFISLDLL 480 RSFATSQINY ILGDNPMKMS YVVGYGTKFP RHVHHRGAST PSDKTRYSCT GGWKWRDSSK 540 PNPHNITGAM VGGPDRFDQF RDVRTNYNFT EPTLAGNAGL VAALASLTSS GGIGIDKNSI 600 FTAVPPLYPP SPPSPPAWKP * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02909 | PLN02909 | 2.0e-103 | 111 | 572 | 476 | + Endoglucanase | ||
PLN02613 | PLN02613 | 4.0e-107 | 110 | 573 | 479 | + endoglucanase | ||
PLN02266 | PLN02266 | 8.0e-114 | 102 | 572 | 483 | + endoglucanase | ||
PLN02345 | PLN02345 | 3.0e-136 | 115 | 573 | 469 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 3.0e-149 | 111 | 573 | 471 | + Glycosyl hydrolase family 9. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACT54547.1 | 0 | 1 | 604 | 1 | 612 | endo-1,4-beta-glucanase [Dimocarpus longan] |
RefSeq | XP_002266444.1 | 0 | 1 | 604 | 1 | 603 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002312211.1 | 0 | 1 | 620 | 1 | 620 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315101.1 | 0 | 1 | 604 | 1 | 605 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514768.1 | 0 | 1 | 604 | 1 | 608 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 111 | 591 | 4 | 432 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 1ksc_A | 0 | 111 | 591 | 4 | 432 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 1ks8_A | 0 | 111 | 591 | 4 | 432 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 108 | 614 | 2 | 462 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 108 | 614 | 2 | 462 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |