Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.008G132700.1 |
Family | GH9 |
Protein Properties | Length: 497 Molecular Weight: 54963.4 Isoelectric Point: 9.0882 |
Chromosome | Chromosome/Scaffold: 08 Start: 8784258 End: 8788907 |
Description | glycosyl hydrolase 9B1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 35 | 490 | 0 |
DYHDALRKSILFFEGQRSGKLPPDQRVKWRRDSALHDGSTVGRDLTGGYYDAGDNIKFGFPMAFTTTLLSWSIVDFGRNMGPELKNAVKAVKWATDYLLK VTAVPDVVYVQVGDAYSDHNCWERPEDMDTLRSAYKIDGSHPGSDVAGETAAALAAASIVFRSRDPAYSRLLLNRAVRVFDFADRHRGAYSGSLRSAVCP FYCDVNGYQDELLWGAVWLHKASRRRRYREYVVKNEVILHAGDTINEFGWDNKHAGINVLISKEVLMGRAEYFESFKQNADDFICSILPGISHPQVQYSP GGLIFKAGGSNMQHVTSLSFLLLAYSSYLSHANKVVPCGETTASPALLKQLAKRQVDYILGDNPLGMSYMVGYGPRYPLRIHHRGSSLPSVQAHPARIRC KEGSRYFLSPNPNPNVHVGAVVGGPNITDAFPDSRPFFQESEPTTYINAPLVGLLA |
Full Sequence |
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Protein Sequence Length: 497 Download |
MARKSLTTSL RNLRVTAVPF LVLLSLHAVI GSGHDYHDAL RKSILFFEGQ RSGKLPPDQR 60 VKWRRDSALH DGSTVGRDLT GGYYDAGDNI KFGFPMAFTT TLLSWSIVDF GRNMGPELKN 120 AVKAVKWATD YLLKVTAVPD VVYVQVGDAY SDHNCWERPE DMDTLRSAYK IDGSHPGSDV 180 AGETAAALAA ASIVFRSRDP AYSRLLLNRA VRVFDFADRH RGAYSGSLRS AVCPFYCDVN 240 GYQDELLWGA VWLHKASRRR RYREYVVKNE VILHAGDTIN EFGWDNKHAG INVLISKEVL 300 MGRAEYFESF KQNADDFICS ILPGISHPQV QYSPGGLIFK AGGSNMQHVT SLSFLLLAYS 360 SYLSHANKVV PCGETTASPA LLKQLAKRQV DYILGDNPLG MSYMVGYGPR YPLRIHHRGS 420 SLPSVQAHPA RIRCKEGSRY FLSPNPNPNV HVGAVVGGPN ITDAFPDSRP FFQESEPTTY 480 INAPLVGLLA YFSAHP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02308 | PLN02308 | 0 | 8 | 496 | 489 | + endoglucanase | ||
PLN02266 | PLN02266 | 0 | 34 | 495 | 462 | + endoglucanase | ||
PLN03009 | PLN03009 | 0 | 20 | 496 | 480 | + cellulase | ||
pfam00759 | Glyco_hydro_9 | 0 | 35 | 490 | 462 | + Glycosyl hydrolase family 9. | ||
PLN02613 | PLN02613 | 0 | 16 | 490 | 480 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ15175.1 | 0 | 30 | 495 | 30 | 495 | AF357588_1 endo-1,4-beta-glucanase isoform 02 [Fragaria x ananassa] |
GenBank | ABK92482.1 | 0 | 1 | 496 | 1 | 496 | unknown [Populus trichocarpa] |
RefSeq | XP_002311518.1 | 0 | 1 | 496 | 1 | 496 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315868.1 | 0 | 29 | 495 | 12 | 478 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527779.1 | 0 | 1 | 495 | 1 | 491 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 34 | 490 | 3 | 426 | A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus |
PDB | 1ksc_A | 0 | 34 | 490 | 3 | 426 | A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus |
PDB | 1ks8_A | 0 | 34 | 490 | 3 | 426 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 35 | 490 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 35 | 490 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |