Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.008G132700.2 |
Family | GH9 |
Protein Properties | Length: 403 Molecular Weight: 44632.8 Isoelectric Point: 9.0325 |
Chromosome | Chromosome/Scaffold: 08 Start: 8784301 End: 8788200 |
Description | glycosyl hydrolase 9B1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 35 | 399 | 0 |
DYHDALRKSILFFEGQRSGKLPPDQRVKWRRDSALHDGSTVGRDLTGGYYDAGDNIKFGFPMAFTTTLLSWSIVDFGRNMGPELKNAVKAVKWATDYLLK VTAVPDVVYVQVGDAYSDHNCWERPEDMDTLRSAYKIDGSHPGSDVAGETAAALAAASIVFRSRDPAYSRLLLNRAVRVFDFADRHRGAYSGSLRSAVCP FYCDVNGYQDELLWGAVWLHKASRRRRYREYVVKNEVILHAGDTINEFGWDNKHAGINVLISKEVLMGRAEYFESFKQNADDFICSILPGISHPQVQYSP GGLIFKAGGSNMQHVTSLSFLLLAYSSYLSHANKVVPCGETTASPALLKQLAKRQVTSILSCSPL |
Full Sequence |
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Protein Sequence Length: 403 Download |
MARKSLTTSL RNLRVTAVPF LVLLSLHAVI GSGHDYHDAL RKSILFFEGQ RSGKLPPDQR 60 VKWRRDSALH DGSTVGRDLT GGYYDAGDNI KFGFPMAFTT TLLSWSIVDF GRNMGPELKN 120 AVKAVKWATD YLLKVTAVPD VVYVQVGDAY SDHNCWERPE DMDTLRSAYK IDGSHPGSDV 180 AGETAAALAA ASIVFRSRDP AYSRLLLNRA VRVFDFADRH RGAYSGSLRS AVCPFYCDVN 240 GYQDELLWGA VWLHKASRRR RYREYVVKNE VILHAGDTIN EFGWDNKHAG INVLISKEVL 300 MGRAEYFESF KQNADDFICS ILPGISHPQV QYSPGGLIFK AGGSNMQHVT SLSFLLLAYS 360 SYLSHANKVV PCGETTASPA LLKQLAKRQV TSILSCSPLT RE* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02171 | PLN02171 | 4.0e-140 | 13 | 398 | 396 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 3.0e-150 | 35 | 399 | 371 | + Glycosyl hydrolase family 9. | ||
PLN03009 | PLN03009 | 5.0e-162 | 20 | 399 | 383 | + cellulase | ||
PLN02266 | PLN02266 | 8.0e-178 | 34 | 399 | 366 | + endoglucanase | ||
PLN02308 | PLN02308 | 0 | 8 | 399 | 392 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ15174.1 | 0 | 30 | 399 | 30 | 399 | AF357587_1 endo-1,4-beta-glucanase isoform 01 [Fragaria x ananassa] |
GenBank | ABK92482.1 | 0 | 1 | 399 | 1 | 399 | unknown [Populus trichocarpa] |
RefSeq | XP_002311518.1 | 0 | 1 | 399 | 1 | 399 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315868.1 | 0 | 29 | 399 | 12 | 382 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527779.1 | 0 | 1 | 399 | 1 | 395 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 34 | 394 | 3 | 339 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1ksc_A | 0 | 34 | 394 | 3 | 339 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1ks8_A | 0 | 34 | 394 | 3 | 339 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 35 | 360 | 5 | 330 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 35 | 360 | 5 | 330 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |