y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.008G160900.1 |
Family | GH47 |
Protein Properties | Length: 614 Molecular Weight: 68865.7 Isoelectric Point: 4.9753 |
Chromosome | Chromosome/Scaffold: 08 Start: 10934661 End: 10943961 |
Description | Glycosyl hydrolase family 47 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 54 | 479 | 0 |
MFYHAFNGYMEHAFPLDELKPLSCEGEDSLGGYALTLIDSLDMLALLGDRERFTSSVDWIGKNLRFDINKTVSVFETTIRVLGGLLSAHLIASDYATGMR IPSYDNQLLDLAEDLARRMLPAFDTPTGIPFGSVNLLYGVDEQESRITSTAGGGTLTLEFGMLSRLTNDPIFEQVTKNAVRGLWARRSKLNLVGAHINVF TGEWTQKDAGIGTSIDSFYEYLLKAYLLFGDEEYLFIFQEAYAAAMHYLYNDPWYVEVNMDSAAIVWPLFNSLQAFWPGLQVLAGDIDPAIRTHAAFFSV WKRYGFTPEGFNLATLTVQHGQKSYPLRPELIESTYWLYKATRDPRYLDVGRDMVVSLQYGARCPCGYCHIVDVEFHKKEDHMESFFLAETVKYLWLLFD LASGPDNLVENGPYKYIFSTEGHLLP |
Full Sequence |
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Protein Sequence Length: 614 Download |
MEKTWKQRCL PLLLLLSILS ADTNHNNIIF LRQTAADGVT PEEATLLRDE VREMFYHAFN 60 GYMEHAFPLD ELKPLSCEGE DSLGGYALTL IDSLDMLALL GDRERFTSSV DWIGKNLRFD 120 INKTVSVFET TIRVLGGLLS AHLIASDYAT GMRIPSYDNQ LLDLAEDLAR RMLPAFDTPT 180 GIPFGSVNLL YGVDEQESRI TSTAGGGTLT LEFGMLSRLT NDPIFEQVTK NAVRGLWARR 240 SKLNLVGAHI NVFTGEWTQK DAGIGTSIDS FYEYLLKAYL LFGDEEYLFI FQEAYAAAMH 300 YLYNDPWYVE VNMDSAAIVW PLFNSLQAFW PGLQVLAGDI DPAIRTHAAF FSVWKRYGFT 360 PEGFNLATLT VQHGQKSYPL RPELIESTYW LYKATRDPRY LDVGRDMVVS LQYGARCPCG 420 YCHIVDVEFH KKEDHMESFF LAETVKYLWL LFDLASGPDN LVENGPYKYI FSTEGHLLPA 480 TPQISLIHEH CSYLGAYCKG GGIEQESRKS DISIHPQENN ASVLSGSWVH SSYPSDSSFL 540 ESTSTSGLMK GLCPGLTHGQ KYGISYLDAT RTAQEDHSTH QRENVADSHS LLVVSQQSAD 600 NSLSKNKNEK QEH* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PTZ00470 | PTZ00470 | 3.0e-77 | 48 | 483 | 478 | + glycoside hydrolase family 47 protein; Provisional | ||
pfam01532 | Glyco_hydro_47 | 1.0e-170 | 54 | 479 | 461 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
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GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI26354.1 | 0 | 37 | 583 | 28 | 607 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_199184.1 | 0 | 14 | 601 | 8 | 578 | glycoside hydrolase family 47 protein [Arabidopsis thaliana] |
RefSeq | XP_002280131.1 | 0 | 37 | 613 | 28 | 605 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311656.1 | 0 | 36 | 600 | 1 | 565 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002517026.1 | 0 | 1 | 610 | 1 | 603 | Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1nxc_A | 0 | 30 | 479 | 1 | 464 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayr_A | 0 | 36 | 452 | 2 | 413 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayq_A | 0 | 36 | 452 | 2 | 413 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayp_A | 0 | 36 | 452 | 2 | 413 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayo_A | 0 | 36 | 452 | 2 | 413 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |