| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.008G183400.2 |
| Family | GH5 |
| Protein Properties | Length: 567 Molecular Weight: 63478.7 Isoelectric Point: 7.779 |
| Chromosome | Chromosome/Scaffold: 08 Start: 12536966 End: 12539995 |
| Description | Cellulase (glycosyl hydrolase family 5) protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH5 | 41 | 352 | 1.68156e-44 |
| IVDENGQRVKLACVNWVSHLEVMVAEGLSEQPMDAIAKRIVSMGFNCVRLTWPVFLVTNDTLGSLTVRQSLRSLGLLESISGIQANNPSIIDLPLLNVYQ AVVSSLGDNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFDPDLWITGLTRMASMFNGVPNVVGMSLRNELRGPKQNVNDWYRYMQKGAEAVHSANPDVI VILSGLNYDKDLSFLRNRPVNLTFSRKIVFEVHWYGFTDGQAWKNGNPNQVCGRVVDNMMRISGFLLDQGWPLFMSEFGVDQRGTNVNDNRYLGCFLGVA AELDFDWALWTL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 567 Download |
| MDRIVFFSFL SIFSFLVTFS DVMIPQKHVT ALPLSTNSRW IVDENGQRVK LACVNWVSHL 60 EVMVAEGLSE QPMDAIAKRI VSMGFNCVRL TWPVFLVTND TLGSLTVRQS LRSLGLLESI 120 SGIQANNPSI IDLPLLNVYQ AVVSSLGDNN VMVILDNHIS KPGWCCSNSD GNGFFGDQYF 180 DPDLWITGLT RMASMFNGVP NVVGMSLRNE LRGPKQNVND WYRYMQKGAE AVHSANPDVI 240 VILSGLNYDK DLSFLRNRPV NLTFSRKIVF EVHWYGFTDG QAWKNGNPNQ VCGRVVDNMM 300 RISGFLLDQG WPLFMSEFGV DQRGTNVNDN RYLGCFLGVA AELDFDWALW TLVGSYYFRQ 360 GVIGMNEYYG VLNSNWRETR NSTFLQQISA LQSPFRGPGV SEVHLHKVIF HPSTGLCVLR 420 KSMFEPLRLG PCTQSEAWNY TPQKILSVKG TYFCLQTDEL AKPAKLGIIC TDSNSKWEAI 480 SDSKMHLSSK APNGTAVCLD IGYNNTIVTS TCKCLSKDNT CDPESQWFKL VNSTRRSSTM 540 TKPSSLISSI LNFPAKDFLW KFLGSV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00150 | Cellulase | 2.0e-15 | 42 | 352 | 318 | + Cellulase (glycosyl hydrolase family 5). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_172772.2 | 0 | 31 | 551 | 32 | 552 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002285424.1 | 0 | 27 | 553 | 22 | 545 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002312657.1 | 0 | 23 | 566 | 1 | 544 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002315653.1 | 0 | 31 | 542 | 2 | 512 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515055.1 | 0 | 25 | 564 | 25 | 564 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1vrx_B | 0.00000000000005 | 36 | 351 | 8 | 320 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1vrx_A | 0.00000000000005 | 36 | 351 | 8 | 320 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1ece_B | 0.0000000000005 | 36 | 351 | 8 | 320 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 1ece_A | 0.0000000000005 | 36 | 351 | 8 | 320 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 4dm1_C | 0.0005 | 49 | 276 | 28 | 267 | A Chain A, Contribution Of Disulfide Bond Toward Thermostability In Hyperthermostable Endocellulase |
