| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.008G204200.1 |
| Family | GH14 |
| Protein Properties | Length: 536 Molecular Weight: 59374.8 Isoelectric Point: 6.7916 |
| Chromosome | Chromosome/Scaffold: 08 Start: 14728874 End: 14731489 |
| Description | beta-amylase 3 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 87 | 495 | 0 |
| FVGLPLDAVSDCNTVNHARAIAAGLRALKLLGIDGVELPVWWGIVEKESMGKYDWSGYLVLAEMIQNAGLKLHVSLCFHGSKQPKIPLPEWVSQIGDSEP SIYHADRSGNHYRECLSLAVDEVPVLNGKTPVQVYQEFCESFKSSFSHFFGSTITGVTVGLGPDGELRYPSHRQLASHSNILGVGEFQCYDKNMLNLLKV KAEATGNPLWGLGGPHDAPSYDQFPNSNHFFKDNGGSWDSPYGDFFLSWYSSELLSHGDRLLSLASTSFGDTSVTVHGKIPLMHSWYKTRSHPSELTAGF YNTVSRDGYEAVAEMFARNSCKMILPGMDLSDKHQPQESLSSPESILAQIRTVCRKHGVEISGQNSVVSKAPHGFEQIKKNISGESAVDLFTYQRMGADF FSPEHFPSF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 536 Download |
| MEVSVIGSSS QAKICTSWSE LSSYREIRFC NFQKRVSLLH NTKSTRWRNS GLSFTLNAVQ 60 SSPVRSDRRR RPGSSSKPKS LDGVRVFVGL PLDAVSDCNT VNHARAIAAG LRALKLLGID 120 GVELPVWWGI VEKESMGKYD WSGYLVLAEM IQNAGLKLHV SLCFHGSKQP KIPLPEWVSQ 180 IGDSEPSIYH ADRSGNHYRE CLSLAVDEVP VLNGKTPVQV YQEFCESFKS SFSHFFGSTI 240 TGVTVGLGPD GELRYPSHRQ LASHSNILGV GEFQCYDKNM LNLLKVKAEA TGNPLWGLGG 300 PHDAPSYDQF PNSNHFFKDN GGSWDSPYGD FFLSWYSSEL LSHGDRLLSL ASTSFGDTSV 360 TVHGKIPLMH SWYKTRSHPS ELTAGFYNTV SRDGYEAVAE MFARNSCKMI LPGMDLSDKH 420 QPQESLSSPE SILAQIRTVC RKHGVEISGQ NSVVSKAPHG FEQIKKNISG ESAVDLFTYQ 480 RMGADFFSPE HFPSFTHFIR NLNQLGMFSD DLPEEEEVVE SVLLNSESNT HMQAA* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 9.0e-84 | 84 | 503 | 435 | + beta-amylase | ||
| PLN02801 | PLN02801 | 2.0e-99 | 84 | 502 | 435 | + beta-amylase | ||
| PLN02161 | PLN02161 | 9.0e-104 | 84 | 503 | 437 | + beta-amylase | ||
| PLN00197 | PLN00197 | 5.0e-119 | 83 | 504 | 434 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 4.0e-124 | 83 | 506 | 431 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAI39245.1 | 0 | 1 | 535 | 1 | 536 | beta-amylase [Glycine max] |
| EMBL | CAN66037.1 | 0 | 1 | 533 | 1 | 537 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002276777.1 | 0 | 1 | 533 | 1 | 537 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002312750.1 | 0 | 81 | 517 | 1 | 437 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516865.1 | 0 | 1 | 535 | 1 | 545 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1b1y_A | 0 | 84 | 503 | 6 | 436 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 2xgi_A | 0 | 84 | 503 | 10 | 440 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 2xgb_A | 0 | 84 | 503 | 10 | 440 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 2xg9_A | 0 | 84 | 503 | 10 | 440 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 2xfy_A | 0 | 84 | 503 | 10 | 440 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO781436 | 382 | 132 | 513 | 0 |
| HO796964 | 367 | 147 | 513 | 0 |
| CN520455 | 271 | 92 | 362 | 0 |
| EG631213 | 354 | 183 | 536 | 0 |
| HO781436 | 125 | 21 | 138 | 2e-25 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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