Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.009G006900.1 |
Family | GH29 |
Protein Properties | Length: 560 Molecular Weight: 63074 Isoelectric Point: 5.5187 |
Chromosome | Chromosome/Scaffold: 09 Start: 1268549 End: 1271694 |
Description | alpha-L-fucosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH29 | 87 | 383 | 0 |
QFQWQLSSMALFFHFGTNTFTDSEWGTGQVDPSVFNPTRLNTTQWVQVAKDSGFNRVILTAKHHDGFCLWPSEYTDYSVKSTSWRNGSGDVVKELSLAAK EAGVDLGLYLSPWDRHEGCYGKTLEYNEFYLGQMTELLTRYGEIKEVWLDGAKGEGEKDMEYFFDSWFSLIHQHQPGAIIFSDAGPDTRWIGDEAGVAGS TCWSLFNRSSAQIGNTDPIYSQGGDPSGHDWVPAECDVSIRPGWFWHASEVPKSAIKLLDIYYKSVGRNCLLLLNVPPNSSGLISDEDIQVLKEFSE |
Full Sequence |
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Protein Sequence Length: 560 Download |
KEVTTSTLRD QCSKTSLHKC LTLKAKSFDL LILPVVFHYE ENHQTPEPRT MNLILLCLSF 60 SLIFPISHCA LQKPPPLPIL PIPTASQFQW QLSSMALFFH FGTNTFTDSE WGTGQVDPSV 120 FNPTRLNTTQ WVQVAKDSGF NRVILTAKHH DGFCLWPSEY TDYSVKSTSW RNGSGDVVKE 180 LSLAAKEAGV DLGLYLSPWD RHEGCYGKTL EYNEFYLGQM TELLTRYGEI KEVWLDGAKG 240 EGEKDMEYFF DSWFSLIHQH QPGAIIFSDA GPDTRWIGDE AGVAGSTCWS LFNRSSAQIG 300 NTDPIYSQGG DPSGHDWVPA ECDVSIRPGW FWHASEVPKS AIKLLDIYYK SVGRNCLLLL 360 NVPPNSSGLI SDEDIQVLKE FSELRRSIFS DNLAGNAILN ASSTRGSIGD SRFDPYNIFK 420 EGIYTYWAPE ENVSDWALHL NLQESVSFNV LQVQEPIHMG QRIMAFHLEV LNEDGDWRMV 480 INGTTVGYQR LLHFPNVESQ HLKFVIDKSR ADPLISYLGI YMDQFSIVNS AFHRSSPTNN 540 YSSQVLRQAI HNHSTTASI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00812 | Alpha_L_fucos | 3.0e-35 | 121 | 381 | 285 | + Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis. | ||
pfam01120 | Alpha_L_fucos | 3.0e-36 | 121 | 381 | 278 | + Alpha-L-fucosidase. | ||
COG3669 | COG3669 | 6.0e-68 | 89 | 521 | 451 | + Alpha-L-fucosidase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004560 | alpha-L-fucosidase activity |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_180377.2 | 0 | 73 | 526 | 28 | 482 | ATFUC1 (alpha-L-fucosidase 1); alpha-L-fucosidase [Arabidopsis thaliana] |
Swiss-Prot | Q8GW72 | 0 | 73 | 526 | 28 | 482 | FUCO1_ARATH RecName: Full=Alpha-L-fucosidase 1; AltName: Full=Alpha-L-fucoside fucohydrolase; AltName: Full=Alpha-1,3/4-fucosidase; Short=AtFUC1; Flags: Precursor |
RefSeq | XP_002276131.1 | 0 | 84 | 559 | 51 | 545 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313533.1 | 0 | 70 | 526 | 1 | 457 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523703.1 | 0 | 70 | 548 | 50 | 530 | alpha-l-fucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ues_B | 0 | 83 | 516 | 19 | 471 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis Complexed With Deoxyfuconojirimycin |
PDB | 3ues_A | 0 | 83 | 516 | 19 | 471 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis Complexed With Deoxyfuconojirimycin |
PDB | 3mo4_B | 0 | 83 | 516 | 21 | 473 | A Chain A, The Crystal Structure Of An Alpha-(1-3,4)-Fucosidase From Bifidobacterium Longum Subsp. Infantis Atcc 15697 |
PDB | 3mo4_A | 0 | 83 | 516 | 21 | 473 | A Chain A, The Crystal Structure Of An Alpha-(1-3,4)-Fucosidase From Bifidobacterium Longum Subsp. Infantis Atcc 15697 |
PDB | 3uet_B | 0 | 83 | 516 | 19 | 471 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis D172aE217A MUTANT COMPLEXED WITH LACTO-N- Fucopentaose Ii |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY270181 | 287 | 87 | 373 | 0 |
DY291901 | 282 | 87 | 368 | 0 |
DY300194 | 325 | 112 | 434 | 0 |
FC905625 | 277 | 87 | 363 | 0 |
DY300194 | 35 | 84 | 118 | 0.0000001 |
Sequence Alignments (This image is cropped. Click for full image.) |
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