y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.009G012400.1 |
Family | GH35 |
Protein Properties | Length: 865 Molecular Weight: 94037.3 Isoelectric Point: 6.7 |
Chromosome | Chromosome/Scaffold: 09 Start: 2140628 End: 2149074 |
Description | beta-galactosidase 8 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 39 | 342 | 0 |
LLIDGKRRVLVSGSIHYPRSTVEMWADLIQKSKDGGLDVIETYVFWNAHEPVQNQYNFEGRYDLVKFIKLVGEAGLYAHLRIGPYVCAEWNYGGFPLWLH FVPGIKFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSSYGPAAKSYINWAASMAVSLDTGVPWVMCQQADAPDPIINTCNG FYCDQFTPNSKNKPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFYQLGGTFQNYYMYHGGTNFGRSTGGPFISTSYDYDAPLDEYGLTRQPKWGHLK DLHK |
Full Sequence |
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Protein Sequence Length: 865 Download |
MRGRDQILQL LLLYVFLSVL LTLATTSYGV NVTYDHRALL IDGKRRVLVS GSIHYPRSTV 60 EMWADLIQKS KDGGLDVIET YVFWNAHEPV QNQYNFEGRY DLVKFIKLVG EAGLYAHLRI 120 GPYVCAEWNY GGFPLWLHFV PGIKFRTDNE PFKAEMQRFT AKIVDMMKQE KLYASQGGPI 180 ILSQIENEYG NIDSSYGPAA KSYINWAASM AVSLDTGVPW VMCQQADAPD PIINTCNGFY 240 CDQFTPNSKN KPKMWTENWS GWFLSFGGAV PYRPVEDLAF AVARFYQLGG TFQNYYMYHG 300 GTNFGRSTGG PFISTSYDYD APLDEYGLTR QPKWGHLKDL HKSIKLCEEA LVATDPVTSS 360 LGQNLEATVY KTGTGLCSAF LANFGTSDKT VNFNGNSYNL PGWSVSILPD CKNVALNTAK 420 YVLPDCKNVA LNTAKINSMT VIPNFVHQSL IGDADSADTL GSSWSWIYEP VGISKNDAFV 480 KPGLLEQINT TADKSDYLWY SLSTVIKDNE PFLEDGSQTV LHVESLGHAL HAFVNGKLAG 540 SGTGNAGNAK VAVEIPVTLL PGKNTIDLLS LTAGLQNYGA FFELEGAGIT GPVKLEGLKN 600 GTTVDLSSLQ WTYQIGLKGE ESGLSSGNSQ WVTQPALPTK QPLIWYKTSF NAPAGNDPIA 660 IDFSGMGKGE AWVNGQSIGR YWPTKVSPTS GCSNCNYRGS YSSSKCLKNC AKPSQTLYHV 720 PRSWVESSGN TLVLFEEIGG DPTQIAFATK QSASLCSHVS ESHPLPVDMW SSNSEAERKA 780 GPVLSLECPF PNQVISSIKF ASFGTPRGTC GSFSHGQCKS TRALSIVQKA CIGSKSCSIG 840 ASASTFGDPC RGVAKSLAVE ASCA* 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 9.0e-7 | 54 | 208 | 172 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 1.0e-23 | 786 | 863 | 82 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 6.0e-24 | 32 | 334 | 357 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 1.0e-167 | 38 | 344 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 31 | 864 | 840 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD91083.1 | 0 | 24 | 863 | 14 | 841 | beta-D-galactosidase [Pyrus pyrifolia] |
EMBL | CAC44501.1 | 0 | 24 | 863 | 22 | 839 | beta-galactosidase [Fragaria x ananassa] |
EMBL | CBI16297.1 | 0 | 12 | 863 | 6 | 845 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002314274.1 | 0 | 1 | 864 | 1 | 849 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530296.1 | 0 | 3 | 863 | 2 | 841 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 1.96182e-44 | 39 | 340 | 15 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.0004 | 515 | 739 | 395 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 8e-38 | 41 | 327 | 12 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 0.001 | 562 | 750 | 439 | 584 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_A | 8e-38 | 41 | 327 | 12 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |