| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.009G012400.5 |
| Family | GH35 |
| Protein Properties | Length: 592 Molecular Weight: 65750.8 Isoelectric Point: 6.2414 |
| Chromosome | Chromosome/Scaffold: 09 Start: 2140628 End: 2146512 |
| Description | beta-galactosidase 8 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 39 | 342 | 0 |
| LLIDGKRRVLVSGSIHYPRSTVEMWADLIQKSKDGGLDVIETYVFWNAHEPVQNQYNFEGRYDLVKFIKLVGEAGLYAHLRIGPYVCAEWNYGGFPLWLH FVPGIKFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSSYGPAAKSYINWAASMAVSLDTGVPWVMCQQADAPDPIINTCNG FYCDQFTPNSKNKPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFYQLGGTFQNYYMYHGGTNFGRSTGGPFISTSYDYDAPLDEYGLTRQPKWGHLK DLHK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 592 Download |
| MRGRDQILQL LLLYVFLSVL LTLATTSYGV NVTYDHRALL IDGKRRVLVS GSIHYPRSTV 60 EMWADLIQKS KDGGLDVIET YVFWNAHEPV QNQYNFEGRY DLVKFIKLVG EAGLYAHLRI 120 GPYVCAEWNY GGFPLWLHFV PGIKFRTDNE PFKAEMQRFT AKIVDMMKQE KLYASQGGPI 180 ILSQIENEYG NIDSSYGPAA KSYINWAASM AVSLDTGVPW VMCQQADAPD PIINTCNGFY 240 CDQFTPNSKN KPKMWTENWS GWFLSFGGAV PYRPVEDLAF AVARFYQLGG TFQNYYMYHG 300 GTNFGRSTGG PFISTSYDYD APLDEYGLTR QPKWGHLKDL HKSIKLCEEA LVATDPVTSS 360 LGQNLEATVY KTGTGLCSAF LANFGTSDKT VNFNGNSYNL PGWSVSILPD CKNVALNTAK 420 INSMTVIPNF VHQSLIGDAD SADTLGSSWS WIYEPVGISK NDAFVKPGLL EQINTTADKS 480 DYLWYSLSTV IKDNEPFLED GSQTVLHVES LGHALHAFVN GKLAGSGTGN AGNAKVAVEI 540 PVTLLPGKNT IDLLSLTAGL QVRLSSLRFM QFFILWKIPY LDALIFNFVR I* 600 |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam02449 | Glyco_hydro_42 | 1.0e-6 | 54 | 201 | 164 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. |
| COG1874 | LacA | 6.0e-23 | 32 | 334 | 357 | + Beta-galactosidase [Carbohydrate transport and metabolism] |
| pfam01301 | Glyco_hydro_35 | 7.0e-168 | 38 | 344 | 322 | + Glycosyl hydrolases family 35. |
| PLN03059 | PLN03059 | 0 | 31 | 560 | 538 | + beta-galactosidase; Provisional |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD91083.1 | 0 | 24 | 561 | 14 | 552 | beta-D-galactosidase [Pyrus pyrifolia] |
| EMBL | CAC44501.1 | 0 | 24 | 561 | 22 | 552 | beta-galactosidase [Fragaria x ananassa] |
| EMBL | CBI16297.1 | 0 | 12 | 561 | 6 | 556 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002314274.1 | 0 | 1 | 561 | 1 | 561 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530296.1 | 0 | 3 | 561 | 2 | 553 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 2.8026e-45 | 38 | 340 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 9e-39 | 41 | 327 | 12 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_A | 9e-39 | 41 | 327 | 12 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8c_B | 9e-39 | 41 | 327 | 12 | 313 | A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose |
| PDB | 4e8c_A | 9e-39 | 41 | 327 | 12 | 313 | A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
