y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.009G015400.3 |
Family | AA2 |
Protein Properties | Length: 184 Molecular Weight: 19982.7 Isoelectric Point: 4.8676 |
Chromosome | Chromosome/Scaffold: 09 Start: 2615414 End: 2618311 |
Description | ascorbate peroxidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 53 | 179 | 5e-34 |
RSDKPEPPPEGRLPDATKGSDHLRDVFGHMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTANPLIFDNSYFKELLSGEKEGLLQLPSDKALLSDPIFRP YVDKYAADEDAFFADYSEAHLKLSELG |
Full Sequence |
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Protein Sequence Length: 184 Download |
MALTMVSTLL SDSLSPSRSS FPSSPMPIST NLLVLLVLKS LVVLRFLSTL GERSDKPEPP 60 PEGRLPDATK GSDHLRDVFG HMGLSDKDIV ALSGGHTLGR CHKERSGFEG PWTANPLIFD 120 NSYFKELLSG EKEGLLQLPS DKALLSDPIF RPYVDKYAAD EDAFFADYSE AHLKLSELGF 180 ADA* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00314 | plant_peroxidase_like | 2.0e-14 | 53 | 156 | 125 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
PLN02364 | PLN02364 | 6.0e-51 | 53 | 183 | 132 | + L-ascorbate peroxidase 1 | ||
PLN02608 | PLN02608 | 2.0e-54 | 53 | 180 | 128 | + L-ascorbate peroxidase | ||
PLN02879 | PLN02879 | 1.0e-54 | 53 | 182 | 130 | + L-ascorbate peroxidase | ||
cd00691 | ascorbate_peroxidase | 3.0e-58 | 54 | 183 | 134 | + Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water. |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABX79340.1 | 0 | 53 | 183 | 119 | 249 | cytosolic ascorbate peroxidase [Vitis vinifera] |
GenBank | ACF06591.1 | 0 | 53 | 183 | 119 | 249 | cytosolic ascorbate peroxidase [Elaeis guineensis] |
GenBank | ADC95633.1 | 0 | 53 | 183 | 119 | 250 | L-ascorbate peroxidase [Bruguiera gymnorhiza] |
EMBL | CBI32625.1 | 0 | 53 | 183 | 119 | 249 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002313506.1 | 0 | 53 | 183 | 119 | 249 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3zcy_A | 0 | 53 | 183 | 118 | 249 | A Chain A, Ascorbate Peroxidase W41a-h42y Mutant |
PDB | 3zch_A | 0 | 53 | 183 | 130 | 261 | A Chain A, Ascorbate Peroxidase W41a-h42m Mutant |
PDB | 3zcg_A | 0 | 53 | 183 | 130 | 261 | A Chain A, Ascorbate Peroxidase W41a-h42c Mutant |
PDB | 2wd4_A | 0 | 53 | 183 | 130 | 261 | A Chain A, Ascorbate Peroxidase W41a-h42c Mutant |
PDB | 2vo2_X | 0 | 53 | 183 | 130 | 261 | A Chain A, Ascorbate Peroxidase W41a-h42c Mutant |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
ascorbate glutathione cycle | RXN-3521 | - | L-ascorbate peroxidase |
L-ascorbate degradation III | RXN-12440 | EC-1.11.1.11 | L-ascorbate peroxidase |
L-ascorbate degradation V | RXN-12440 | EC-1.11.1.11 | L-ascorbate peroxidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
AJ776914 | 130 | 55 | 184 | 0 |
CV252337 | 132 | 53 | 184 | 0 |
CA932168 | 132 | 53 | 184 | 0 |
DT501049 | 132 | 53 | 184 | 0 |
CF118884 | 132 | 53 | 184 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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