Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.009G032500.1 |
Family | GT47 |
Protein Properties | Length: 576 Molecular Weight: 67659.5 Isoelectric Point: 8.8335 |
Chromosome | Chromosome/Scaffold: 09 Start: 4287250 End: 4288977 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 140 | 482 | 0 |
CVGRYIYIHNLPSRFNGDLVRHCQSLNEWSNMCPYLSNFGFGPRLKNSERTLSNTGWYDTNQFMLEIIFHHKMKQYKCLTNDSSLASAIFVPYYSGLDVA RYLWNADKKMKDYYSRHLVRWLRESPEWKRLWGSDHFMVAGRITWDFRRLTNNNNDWGNQLMILPESRNMTVLTIESSPWNNNDFAVPYPTYFHPSSDNE VFQWQNRMRRLKRQFLFSFAGGPRPDLPDSIRSDIIEQCQAAREKCLLLECITGSSNCYEPVNLMKMFQSSTFCLQPPGDSYTRRSTFDSILAGCIPVFF HPGSSYAQYLWHFPRDYTKYSVFIPANKIKDEKVSIERTLSRI |
Full Sequence |
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Protein Sequence Length: 576 Download |
MDTKATGNPV DNFFTGGDWD KYLREVSNAG KESKPENQIH LTENEARSIN KVFGEGNREE 60 SGNARSTARE NQVKKPFDHS LPREARRRRV KKPAREKRVK KQVDHSLPRE EKVIEEVIEQ 120 PNKEDQIRRQ TNSDSHPESC VGRYIYIHNL PSRFNGDLVR HCQSLNEWSN MCPYLSNFGF 180 GPRLKNSERT LSNTGWYDTN QFMLEIIFHH KMKQYKCLTN DSSLASAIFV PYYSGLDVAR 240 YLWNADKKMK DYYSRHLVRW LRESPEWKRL WGSDHFMVAG RITWDFRRLT NNNNDWGNQL 300 MILPESRNMT VLTIESSPWN NNDFAVPYPT YFHPSSDNEV FQWQNRMRRL KRQFLFSFAG 360 GPRPDLPDSI RSDIIEQCQA AREKCLLLEC ITGSSNCYEP VNLMKMFQSS TFCLQPPGDS 420 YTRRSTFDSI LAGCIPVFFH PGSSYAQYLW HFPRDYTKYS VFIPANKIKD EKVSIERTLS 480 RIPIQRVWAM REEVIKLIPG MVYADPSYGL ETLKDAFDLT IDGVLERVEK IKMDIKAGKN 540 FSEDIEEYTW KKNLFGTERK HEWDHFFDRS KMIMY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-67 | 139 | 482 | 360 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN64889.1 | 0 | 7 | 552 | 92 | 712 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_180468.1 | 0 | 120 | 569 | 269 | 719 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002280815.1 | 0 | 109 | 570 | 48 | 524 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313430.1 | 0 | 1 | 575 | 1 | 575 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |
RefSeq | XP_002321098.1 | 0 | 138 | 570 | 48 | 481 | predicted protein [Populus trichocarpa] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG636298 | 265 | 211 | 475 | 0 |
EL456596 | 269 | 187 | 455 | 0 |
CX076275 | 262 | 214 | 475 | 0 |
CF668912 | 281 | 254 | 534 | 0 |
GR934411 | 275 | 133 | 407 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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