Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.009G042500.1 |
Family | AA1 |
Protein Properties | Length: 557 Molecular Weight: 60740 Isoelectric Point: 9.115 |
Chromosome | Chromosome/Scaffold: 09 Start: 4926070 End: 4929986 |
Description | Laccase/Diphenol oxidase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 24 | 542 | 0 |
MVRHYKFNVVMKNSTKLCSTKPIVTVNGQFPGPTLVAREDDTVLVKVVNHVKYNVSIHWHGIRQLRTGWADGPAYITQCPIQPGQSFVYNFTITGQRGTL LWHAHILWLRATVHGAIVILPKRGVPYPFPTPRKEKVIILGEWWKSDVEAVINEATKSGIAPNVSDAHTINGHPGPVSACSSHGGYNLSVHPGKTYMLRI INAALNEELFFKIAGHQLTVVEVDATYVKPFKIDTVVIAPGQTTNVLVTANRGSGQYLVAASPFMDAPIAVDNVTATATLHYSGTLASTITTLTVPPAKN ATPVATNFTNALRSLNSIKYPARVPLKIDHSLFFTVGLGVNPCATCINGSRVVADINNVTFVMPTIALLQAHVFNISGVFTDDFPANPPTPFNYTGTQPT NFQTVKGTKLYRLAYNNTVQLVLQDTGMLTPENHPVHLHGFNFFEVGRGVGNFDPNKDPKKFNLVDPVERNTIGVPAGGWTAIRFIADNPGVWFMHCHLE VHTTWGLKMAFVVDNGKGP |
Full Sequence |
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Protein Sequence Length: 557 Download |
MDMAPWIRVL VLVACLFPAS VESMVRHYKF NVVMKNSTKL CSTKPIVTVN GQFPGPTLVA 60 REDDTVLVKV VNHVKYNVSI HWHGIRQLRT GWADGPAYIT QCPIQPGQSF VYNFTITGQR 120 GTLLWHAHIL WLRATVHGAI VILPKRGVPY PFPTPRKEKV IILGEWWKSD VEAVINEATK 180 SGIAPNVSDA HTINGHPGPV SACSSHGGYN LSVHPGKTYM LRIINAALNE ELFFKIAGHQ 240 LTVVEVDATY VKPFKIDTVV IAPGQTTNVL VTANRGSGQY LVAASPFMDA PIAVDNVTAT 300 ATLHYSGTLA STITTLTVPP AKNATPVATN FTNALRSLNS IKYPARVPLK IDHSLFFTVG 360 LGVNPCATCI NGSRVVADIN NVTFVMPTIA LLQAHVFNIS GVFTDDFPAN PPTPFNYTGT 420 QPTNFQTVKG TKLYRLAYNN TVQLVLQDTG MLTPENHPVH LHGFNFFEVG RGVGNFDPNK 480 DPKKFNLVDP VERNTIGVPA GGWTAIRFIA DNPGVWFMHC HLEVHTTWGL KMAFVVDNGK 540 GPNESVLPPP PDLPKC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02191 | PLN02191 | 1.0e-74 | 1 | 546 | 586 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 3.0e-92 | 10 | 534 | 553 | + oxidoreductase | ||
TIGR03388 | ascorbase | 7.0e-101 | 25 | 534 | 546 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 25 | 556 | 537 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002280416.1 | 0 | 3 | 556 | 1 | 554 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299828.1 | 0 | 3 | 556 | 1 | 554 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002314124.1 | 0 | 1 | 556 | 1 | 556 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002322961.1 | 0 | 7 | 556 | 6 | 557 | laccase 1a [Populus trichocarpa] |
RefSeq | XP_002520425.1 | 0 | 1 | 556 | 1 | 556 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 23 | 535 | 1 | 522 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complex With Substrate |
PDB | 1asq_A | 0 | 23 | 535 | 1 | 522 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complex With Substrate |
PDB | 1asp_B | 0 | 23 | 535 | 1 | 522 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complex With Substrate |