Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.009G042800.1 |
Family | GH3 |
Protein Properties | Length: 610 Molecular Weight: 66861.5 Isoelectric Point: 5.2025 |
Chromosome | Chromosome/Scaffold: 09 Start: 4946438 End: 4953245 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 85 | 320 | 0 |
LQSRLGIPIIYGIDAVHGNNGVYGTTIFPHNVGLGATRDADLVRRIGVATALEVRACGIQYTFAPCVAVCRDPRWGRCYESYSEDTNIVREMASIVTGLQ GQPPEGHPNGYPFLAGRNNVIACAKHFVGDGGTHKGLNEGDTILSYEDLERIHMAPYLDCISQGVGTIMVSYSSWNGRQLHAHHFLLTEVLKDKLGFKGF VISDWEALDRLSKPLGSNYRRCVSTAVNAGTDMVMV |
Full Sequence |
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Protein Sequence Length: 610 Download |
MESSSCIYKD PNSPIEARVK DLLSRMTLKE KVAQMTQIER SVATPHYLQD LGIGSVMNAG 60 GSAPFPNAKS SDWADMVDWF QKLALQSRLG IPIIYGIDAV HGNNGVYGTT IFPHNVGLGA 120 TRDADLVRRI GVATALEVRA CGIQYTFAPC VAVCRDPRWG RCYESYSEDT NIVREMASIV 180 TGLQGQPPEG HPNGYPFLAG RNNVIACAKH FVGDGGTHKG LNEGDTILSY EDLERIHMAP 240 YLDCISQGVG TIMVSYSSWN GRQLHAHHFL LTEVLKDKLG FKGFVISDWE ALDRLSKPLG 300 SNYRRCVSTA VNAGTDMVMV GQKHREFMKD LIFLAESGEI PMTRIDDAVE RILRVKFVAG 360 LFEYPFADRS LLDIVGCKLH RELAREAVRK SLVLLKNGKD PKKPLLPLDR SAKKILVAGT 420 HADNLGYQCG GWTIAWNGMS GRITIGTTIL DAIKEAIGEE TEVIYEKIPS PDTLASQDFS 480 FAIVAVGEDP YAEFTGDNSE LAIPFNGADI ISSVADKIPT LVILISGRPL VIEPWLLEKI 540 DGLIAAWLPG TEGEGITDVI FGDYDFSGRL PVTWFRKVEQ LPMNLRDNSE EPLFPLGFGL 600 TCEAGNSFD* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 8.0e-40 | 14 | 589 | 632 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-55 | 392 | 601 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 6.0e-88 | 27 | 355 | 333 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 8.0e-90 | 26 | 463 | 446 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
PRK15098 | PRK15098 | 5.0e-90 | 16 | 601 | 649 | + beta-D-glucoside glucohydrolase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN81230.1 | 0 | 6 | 601 | 3 | 631 | hypothetical protein [Vitis vinifera] |
EMBL | CBI16000.1 | 0 | 26 | 601 | 1 | 578 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002279757.1 | 0 | 1 | 601 | 110 | 712 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313393.1 | 0 | 1 | 609 | 1 | 603 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525596.1 | 0 | 6 | 601 | 4 | 599 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 7 | 608 | 4 | 605 | B Chain B, Otu Domain Of Crimean Congo Hemorrhagic Fever Virus In Complex With Isg15 |
PDB | 1iex_A | 0 | 7 | 608 | 4 | 605 | B Chain B, Otu Domain Of Crimean Congo Hemorrhagic Fever Virus In Complex With Isg15 |
PDB | 1iew_A | 0 | 7 | 608 | 4 | 605 | B Chain B, Otu Domain Of Crimean Congo Hemorrhagic Fever Virus In Complex With Isg15 |
PDB | 1iev_A | 0 | 7 | 608 | 4 | 605 | B Chain B, Otu Domain Of Crimean Congo Hemorrhagic Fever Virus In Complex With Isg15 |
PDB | 1ieq_A | 0 | 7 | 608 | 4 | 605 | B Chain B, Otu Domain Of Crimean Congo Hemorrhagic Fever Virus In Complex With Isg15 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY265467 | 353 | 134 | 483 | 0 |
HO784016 | 428 | 54 | 480 | 0 |
FC882555 | 290 | 134 | 423 | 0 |
EL455042 | 314 | 61 | 374 | 0 |
HO784016 | 48 | 8 | 55 | 0.0000003 |
Sequence Alignments (This image is cropped. Click for full image.) |
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