Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.009G042800.2 |
Family | GH3 |
Protein Properties | Length: 604 Molecular Weight: 66255.8 Isoelectric Point: 5.1233 |
Chromosome | Chromosome/Scaffold: 09 Start: 4946438 End: 4953245 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 79 | 314 | 0 |
LQSRLGIPIIYGIDAVHGNNGVYGTTIFPHNVGLGATRDADLVRRIGVATALEVRACGIQYTFAPCVAVCRDPRWGRCYESYSEDTNIVREMASIVTGLQ GQPPEGHPNGYPFLAGRNNVIACAKHFVGDGGTHKGLNEGDTILSYEDLERIHMAPYLDCISQGVGTIMVSYSSWNGRQLHAHHFLLTEVLKDKLGFKGF VISDWEALDRLSKPLGSNYRRCVSTAVNAGTDMVMV |
Full Sequence |
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Protein Sequence Length: 604 Download |
MESSSCIYKD PNSPIEARVK DLLSRMTLKE KVAQMTQIER SLVDYLVGSV MNAGGSAPFP 60 NAKSSDWADM VDWFQKLALQ SRLGIPIIYG IDAVHGNNGV YGTTIFPHNV GLGATRDADL 120 VRRIGVATAL EVRACGIQYT FAPCVAVCRD PRWGRCYESY SEDTNIVREM ASIVTGLQGQ 180 PPEGHPNGYP FLAGRNNVIA CAKHFVGDGG THKGLNEGDT ILSYEDLERI HMAPYLDCIS 240 QGVGTIMVSY SSWNGRQLHA HHFLLTEVLK DKLGFKGFVI SDWEALDRLS KPLGSNYRRC 300 VSTAVNAGTD MVMVGQKHRE FMKDLIFLAE SGEIPMTRID DAVERILRVK FVAGLFEYPF 360 ADRSLLDIVG CKLHRELARE AVRKSLVLLK NGKDPKKPLL PLDRSAKKIL VAGTHADNLG 420 YQCGGWTIAW NGMSGRITIG TTILDAIKEA IGEETEVIYE KIPSPDTLAS QDFSFAIVAV 480 GEDPYAEFTG DNSELAIPFN GADIISSVAD KIPTLVILIS GRPLVIEPWL LEKIDGLIAA 540 WLPGTEGEGI TDVIFGDYDF SGRLPVTWFR KVEQLPMNLR DNSEEPLFPL GFGLTCEAGN 600 SFD* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 9.0e-41 | 14 | 583 | 626 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-55 | 386 | 595 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 6.0e-89 | 26 | 457 | 442 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
PRK15098 | PRK15098 | 4.0e-89 | 16 | 595 | 650 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 1.0e-89 | 27 | 349 | 327 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN81230.1 | 0 | 6 | 595 | 3 | 631 | hypothetical protein [Vitis vinifera] |
EMBL | CBI16000.1 | 0 | 26 | 595 | 1 | 578 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002279757.1 | 0 | 1 | 595 | 110 | 712 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313393.1 | 0 | 1 | 603 | 1 | 603 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525596.1 | 0 | 6 | 595 | 4 | 599 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 7 | 602 | 4 | 605 | B Chain B, Otu Domain Of Crimean Congo Hemorrhagic Fever Virus In Complex With Isg15 |
PDB | 1iex_A | 0 | 7 | 602 | 4 | 605 | B Chain B, Otu Domain Of Crimean Congo Hemorrhagic Fever Virus In Complex With Isg15 |
PDB | 1iew_A | 0 | 7 | 602 | 4 | 605 | B Chain B, Otu Domain Of Crimean Congo Hemorrhagic Fever Virus In Complex With Isg15 |
PDB | 1iev_A | 0 | 7 | 602 | 4 | 605 | B Chain B, Otu Domain Of Crimean Congo Hemorrhagic Fever Virus In Complex With Isg15 |
PDB | 1ieq_A | 0 | 7 | 602 | 4 | 605 | B Chain B, Otu Domain Of Crimean Congo Hemorrhagic Fever Virus In Complex With Isg15 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY265467 | 356 | 128 | 480 | 0 |
HO784016 | 428 | 48 | 474 | 0 |
FC882555 | 290 | 128 | 417 | 0 |
EL455042 | 314 | 55 | 368 | 0 |
HO784016 | 48 | 8 | 49 | 0.001 |
Sequence Alignments (This image is cropped. Click for full image.) |
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