Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.009G050300.1 |
Family | GH17 |
Protein Properties | Length: 322 Molecular Weight: 35034.4 Isoelectric Point: 5.0938 |
Chromosome | Chromosome/Scaffold: 09 Start: 5520553 End: 5521832 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 12 | 320 | 0 |
GVCCGKNGNNLPSDQEVVSLYQTNSIGRMRIYYPNRDTLEALRGSNIEVILGVPNDNLRALADASAATTWIQNNVVAYSSNVRFRYIAVGNEVHPGDANA RYVLPAMQNIHDAILSPNLQGQIKVSTAIDTTLLGISYPPSKGSFSDSANPYISPIINILRTNDAPLLANVYPYFRYTDNPQSIDLNYALFTSPEVVVQD GQYGYQNLFDALLDALYAALEKAGAANLSISVSESGWSSEGGNAATAGNAGTFYRNLINHVKQGAPRRSGKAIETYLFAMFDENLKAAAIEQHFGLFLPD RQPKYQLTF |
Full Sequence |
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Protein Sequence Length: 322 Download |
MPVIEHLILS EGVCCGKNGN NLPSDQEVVS LYQTNSIGRM RIYYPNRDTL EALRGSNIEV 60 ILGVPNDNLR ALADASAATT WIQNNVVAYS SNVRFRYIAV GNEVHPGDAN ARYVLPAMQN 120 IHDAILSPNL QGQIKVSTAI DTTLLGISYP PSKGSFSDSA NPYISPIINI LRTNDAPLLA 180 NVYPYFRYTD NPQSIDLNYA LFTSPEVVVQ DGQYGYQNLF DALLDALYAA LEKAGAANLS 240 ISVSESGWSS EGGNAATAGN AGTFYRNLIN HVKQGAPRRS GKAIETYLFA MFDENLKAAA 300 IEQHFGLFLP DRQPKYQLTF G* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 5.0e-110 | 12 | 320 | 311 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX81590.1 | 0 | 10 | 321 | 34 | 346 | beta-1,3-glucanase [Fragaria x ananassa] |
RefSeq | XP_002299791.1 | 0 | 3 | 321 | 16 | 338 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002314087.1 | 0 | 12 | 321 | 1 | 310 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002336706.1 | 0 | 10 | 320 | 12 | 322 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513528.1 | 0 | 10 | 321 | 32 | 343 | Lichenase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 12 | 320 | 3 | 315 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3f55_C | 0 | 12 | 320 | 3 | 315 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3f55_B | 0 | 12 | 320 | 3 | 315 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3f55_A | 0 | 12 | 320 | 3 | 315 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3em5_D | 0 | 12 | 320 | 3 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DT473326 | 220 | 3 | 218 | 0 |
DT476364 | 220 | 3 | 218 | 0 |
CV240736 | 220 | 3 | 218 | 0 |
BU868171 | 209 | 10 | 218 | 0 |
CV130830 | 220 | 3 | 218 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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