Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.009G050400.2 |
Family | GH17 |
Protein Properties | Length: 279 Molecular Weight: 30696.6 Isoelectric Point: 4.5652 |
Chromosome | Chromosome/Scaffold: 09 Start: 5522513 End: 5529069 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 96 | 277 | 0 |
CETSTVNLSYPPSAGAFSTSAGPYINPIVQFLATTGAPLLVNVYTCFSYIDNPQHIDLGYALLNPKGPAVQDGDLNYHNLFDVSLDALYSALERAGGLNV EIVVSETGWLSMGNDAATFSHAEDYYQNVINHIANGTPKRPGRPIETYLFAMFDENQKSGAETERHFGLFFPNKQPKYQLQF |
Full Sequence |
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Protein Sequence Length: 279 Download |
MSGLEAVTGA QSLGVCNGRL GNDLPSEQEV VDFYKSNGIG RMRIYDPNQE TLQAIRETNI 60 ELTLGALIQT FKRSLMPQLQ TIGLVMMQLN LFYLQCETST VNLSYPPSAG AFSTSAGPYI 120 NPIVQFLATT GAPLLVNVYT CFSYIDNPQH IDLGYALLNP KGPAVQDGDL NYHNLFDVSL 180 DALYSALERA GGLNVEIVVS ETGWLSMGND AATFSHAEDY YQNVINHIAN GTPKRPGRPI 240 ETYLFAMFDE NQKSGAETER HFGLFFPNKQ PKYQLQFS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 1.0e-18 | 13 | 65 | 53 | + Glycosyl hydrolases family 17. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-80 | 104 | 277 | 174 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX81589.1 | 0 | 7 | 277 | 3 | 319 | beta-1,3-glucanase [Fragaria x ananassa] |
DDBJ | BAC66186.1 | 0 | 7 | 277 | 29 | 345 | beta-1,3-glucanase [Fragaria x ananassa] |
RefSeq | XP_002299791.1 | 0 | 7 | 277 | 22 | 337 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002314086.1 | 0 | 1 | 278 | 13 | 290 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002336706.1 | 0 | 7 | 277 | 7 | 322 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 13 | 278 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_C | 0 | 13 | 278 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_B | 0 | 13 | 278 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_A | 0 | 13 | 278 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3em5_D | 0 | 13 | 278 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO779722 | 319 | 7 | 279 | 0 |
DY932502 | 311 | 9 | 272 | 0 |
DY932509 | 305 | 9 | 266 | 0 |
BU103698 | 314 | 8 | 279 | 0 |
DY263355 | 321 | 8 | 279 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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