| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.009G087600.1 |
| Family | GH10 |
| Protein Properties | Length: 509 Molecular Weight: 57327.4 Isoelectric Point: 9.4037 |
| Chromosome | Chromosome/Scaffold: 09 Start: 8137125 End: 8139405 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH10 | 156 | 416 | 0 |
| QTKSGFPFGCGMNHYILLSNAYQNWFASRFKFTTFTNEMKWYSTEKEQGHENYTIADAMLSFAEKNGIAVRGHNILWDSPKMQPQWVKNLSPGELRIAAT KRTDSVVRRYSGKLIAWDVMNENMHFSFYEDKLGKNASSEYYLRAYQLDPKTKMFSNEFNTIEYSKEIRASPVNYVKKIKEILSYPGIKGILLGIGIQCH FSSGYPNLVYMRSALDILGSTGLPIWLTEVDVQKGPNQAQYFESILREGYSHPAVKGIIIF | |||
| Full Sequence |
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| Protein Sequence Length: 509 Download |
| MREGVSREGN MFIVACNRSK TSDSISQKVQ LQQTKLYSFS AWVQISEGSE AVDVIFKTTH 60 GEWIRGGSVV AKHGCWSLLK GGMIAHLSGP VEIFFVCNNT RVEVWIDNVS FQPFTTQQWR 120 SHQDKSIEEV RKSTVRFQVT YATGTALGGA AVSIKQTKSG FPFGCGMNHY ILLSNAYQNW 180 FASRFKFTTF TNEMKWYSTE KEQGHENYTI ADAMLSFAEK NGIAVRGHNI LWDSPKMQPQ 240 WVKNLSPGEL RIAATKRTDS VVRRYSGKLI AWDVMNENMH FSFYEDKLGK NASSEYYLRA 300 YQLDPKTKMF SNEFNTIEYS KEIRASPVNY VKKIKEILSY PGIKGILLGI GIQCHFSSGY 360 PNLVYMRSAL DILGSTGLPI WLTEVDVQKG PNQAQYFESI LREGYSHPAV KGIIIFSGPE 420 VAGFSAITLA DKDFKNTPSG DVVDKLIAEW KTRTLKVIAD SKGFAEASLF QGDYNLIVKH 480 PVTNLLTRLR FKVKEDKSQE TTVLHVTD* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 5.0e-31 | 192 | 387 | 208 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 6.0e-50 | 153 | 413 | 279 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 8.0e-74 | 194 | 443 | 272 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002313181.1 | 0 | 1 | 506 | 68 | 573 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002313182.1 | 0 | 1 | 506 | 39 | 540 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002313183.1 | 0 | 1 | 508 | 1 | 508 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532419.1 | 0 | 1 | 508 | 42 | 550 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| RefSeq | XP_002532422.1 | 0 | 1 | 508 | 57 | 564 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1v0n_A | 5e-26 | 145 | 416 | 3 | 266 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
| PDB | 1v0m_A | 5e-26 | 145 | 416 | 3 | 266 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
| PDB | 1v0l_A | 5e-26 | 145 | 416 | 3 | 266 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
| PDB | 1v0k_A | 5e-26 | 145 | 416 | 3 | 266 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
| PDB | 1od8_A | 5e-26 | 145 | 416 | 3 | 266 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| DV141191 | 250 | 152 | 401 | 0 |
| ES830806 | 290 | 43 | 330 | 0 |
| CV887102 | 265 | 245 | 509 | 0 |
| DV134092 | 247 | 1 | 247 | 0 |
| DV156862 | 246 | 1 | 246 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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