| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.009G096400.1 |
| Family | CE6 |
| Protein Properties | Length: 250 Molecular Weight: 27262.1 Isoelectric Point: 5.1906 |
| Chromosome | Chromosome/Scaffold: 09 Start: 8687820 End: 8689120 |
| Description | Domain of unknown function (DUF303) |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE6 | 80 | 173 | 3.8e-31 |
| GPGMSFANAVRERITGVVGLVPCAVGGTAIKEWARGEELYENMVKRAKESVKDGGEIKGLLWFQGESDTSTQIEADAYQGNMEKLIENVREDLG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 250 Download |
| MEEVAQSTKT IFVLAGQSNM SGRGGVIKDS HNNQKLWDRV VPLECQPHPN ILRLSAKLKW 60 EPASEQIHAD IDTKKACGVG PGMSFANAVR ERITGVVGLV PCAVGGTAIK EWARGEELYE 120 NMVKRAKESV KDGGEIKGLL WFQGESDTST QIEADAYQGN MEKLIENVRE DLGLPSLPII 180 QVAIASGLDD NYMEKVREAQ LNINLPNVVC VDAKGLDLKE DHLHLTTESQ VKLGNMLADA 240 YLKHFAASQ* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam03629 | DUF303 | 2.0e-41 | 11 | 243 | 285 | + Domain of unknown function (DUF303). Distribution of this domain seems limited to prokaryotes and viruses. |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM65927.1 | 0 | 11 | 246 | 24 | 260 | unknown [Arabidopsis thaliana] |
| RefSeq | XP_002282529.1 | 0 | 6 | 246 | 765 | 998 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002300236.1 | 0 | 9 | 243 | 1 | 235 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002313872.1 | 0 | 1 | 182 | 1 | 182 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518686.1 | 0 | 1 | 246 | 1 | 255 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2apj_D | 0 | 11 | 246 | 24 | 260 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 2apj_C | 0 | 11 | 246 | 24 | 260 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 2apj_B | 0 | 11 | 246 | 24 | 260 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 2apj_A | 0 | 11 | 246 | 24 | 260 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 1zmb_F | 5e-21 | 12 | 242 | 5 | 225 | A Chain A, Crystal Structure Of The Putative Acetylxylan Esterase From Clostridium Acetobutylicum, Northeast Structural Genomics Target Car6 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| BU892158 | 216 | 1 | 216 | 0 |
| BU874242 | 214 | 1 | 214 | 0 |
| BU834364 | 206 | 6 | 211 | 0 |
| EX659616 | 246 | 3 | 248 | 0 |
| BU874242 | 25 | 214 | 238 | 0.00003 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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