| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.009G117700.1 |
| Family | CE8 |
| Protein Properties | Length: 218 Molecular Weight: 23759.8 Isoelectric Point: 5.0358 |
| Chromosome | Chromosome/Scaffold: 09 Start: 9917662 End: 9919346 |
| Description | pectinesterase 11 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 38 | 107 | 1.5e-24 |
| WVSAENTFASGGKAAAQRVSGDRAAFYGCGILSFRDTLLDGTGSHYCSTCYIEGATDFICGNAASLFEVS | |||
| Full Sequence |
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| Protein Sequence Length: 218 Download |
| MSTAILIRVD RSGQGDFKKI QDAIDSVPSN NPELVFIWVS AENTFASGGK AAAQRVSGDR 60 AAFYGCGILS FRDTLLDGTG SHYCSTCYIE GATDFICGNA ASLFEVSATF YVLLLSCEKI 120 IPGPSVYVRE GDGSSECHQQ CENTTFIFIG MINRQMHGAR QFRNGWADGP ADTTMILMQQ 180 GKEEHYGTPI PFPQTQENGE TMMLKRLKTR EQTGIAI* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02682 | PLN02682 | 0.0002 | 7 | 41 | 36 | + pectinesterase family protein | ||
| PLN02634 | PLN02634 | 1.0e-16 | 48 | 150 | 104 | + probable pectinesterase | ||
| PLN02682 | PLN02682 | 6.0e-19 | 46 | 105 | 60 | + pectinesterase family protein | ||
| PLN02665 | PLN02665 | 9.0e-21 | 6 | 104 | 164 | + pectinesterase family protein | ||
| PLN02432 | PLN02432 | 5.0e-50 | 1 | 150 | 209 | + putative pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN79458.1 | 1e-30 | 1 | 150 | 40 | 232 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002280496.1 | 2e-29 | 1 | 150 | 1 | 193 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002305435.1 | 6e-36 | 1 | 105 | 21 | 182 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002313790.1 | 0 | 1 | 217 | 1 | 217 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512914.1 | 3e-34 | 1 | 105 | 38 | 198 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0.0000007 | 46 | 105 | 109 | 168 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_B | 0.0004 | 57 | 105 | 138 | 186 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_A | 0.0004 | 57 | 105 | 138 | 186 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntp_B | 0.0004 | 57 | 105 | 138 | 186 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntp_A | 0.0004 | 57 | 105 | 138 | 186 | A Chain A, Pectin Methylesterase From Carrot |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| AJ795739 | 210 | 1 | 150 | 2e-29 |
| AM721699 | 159 | 3 | 105 | 2e-29 |
| AJ793669 | 162 | 1 | 105 | 1e-28 |
| DR952425 | 161 | 1 | 105 | 2e-28 |
| AM722128 | 159 | 3 | 105 | 3e-28 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Linum usitatissimum | Lus10000045 | Lus10040446 | |||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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