| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.009G129000.1 |
| Family | GH100 |
| Protein Properties | Length: 575 Molecular Weight: 65669.4 Isoelectric Point: 6.2125 |
| Chromosome | Chromosome/Scaffold: 09 Start: 10549908 End: 10553279 |
| Description | Plant neutral invertase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH100 | 106 | 561 | 0 |
| THPTVAEAWEALRRSLVYFRGEPVGTIAALDNSEEQVNYDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDP VTHNETLMADFGESAIGRVAPVDSGFWWIFLLRAYTKSTGDTSLAEKPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMVDRRMGVYGYPIEIQALFFM ALRCALLLLKQDEEGNEFVERITKRLHALSFHMRSYYWIDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWIFDFMPVRGGYFIGNVSPARMDFRWFC LGNCIAILSSLATPEQSTAIMDLIESRWEELVGEMPLKVIYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWLLTAACIKTGRPQIARRAIELAETR LIKDNWPEYYDGKLGRFIGKQARKSQTWSIAGYLVAKMMLEDPSHLGTVALEEDKQ | |||
| Full Sequence |
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| Protein Sequence Length: 575 Download |
| MSSINVDVSL KGSLRNAETL CDMAEIEEMD FSRIFDRPPR PLNMDRQRSC DERSLSELST 60 GLPIPSPRPS SRVENNFRLI DHLNCLPSPG RRSGFNTPLS QFGVETHPTV AEAWEALRRS 120 LVYFRGEPVG TIAALDNSEE QVNYDQVFVR DFVPSALAFL MNGEPEIVKN FILKTLRLQS 180 WEKKIDRFQL GEGVMPASFK VLHDPVTHNE TLMADFGESA IGRVAPVDSG FWWIFLLRAY 240 TKSTGDTSLA EKPECQKGMR LILSLCLSEG FDTFPTLLCA DGCCMVDRRM GVYGYPIEIQ 300 ALFFMALRCA LLLLKQDEEG NEFVERITKR LHALSFHMRS YYWIDLKQLN DIYRYKTEEY 360 SHTAVNKFNV IPDSLPEWIF DFMPVRGGYF IGNVSPARMD FRWFCLGNCI AILSSLATPE 420 QSTAIMDLIE SRWEELVGEM PLKVIYPAIE SHEWRIVTGC DPKNTRWSYH NGGSWPVLLW 480 LLTAACIKTG RPQIARRAIE LAETRLIKDN WPEYYDGKLG RFIGKQARKS QTWSIAGYLV 540 AKMMLEDPSH LGTVALEEDK QMKPPIRRSN SWTF* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3408 | GDB1 | 0.0002 | 468 | 566 | 107 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
| PLN02973 | PLN02973 | 0 | 1 | 573 | 577 | + beta-fructofuranosidase | ||
| PLN03005 | PLN03005 | 0 | 14 | 573 | 563 | + beta-fructofuranosidase | ||
| pfam12899 | Glyco_hydro_100 | 0 | 112 | 548 | 438 | + Alkaline and neutral invertase. This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853. | ||
| PLN02703 | PLN02703 | 0 | 112 | 563 | 458 | + beta-fructofuranosidase | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAP59641.1 | 0 | 1 | 574 | 1 | 573 | putative neutral invertase [Vitis vinifera] |
| EMBL | CAP59642.1 | 0 | 1 | 574 | 1 | 573 | putative neutral invertase [Vitis vinifera] |
| RefSeq | XP_002276670.1 | 0 | 1 | 574 | 1 | 572 | PREDICTED: similar to putative neutral invertase [Vitis vinifera] |
| RefSeq | XP_002306166.1 | 0 | 1 | 574 | 1 | 573 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002312983.1 | 0 | 1 | 574 | 1 | 574 | predicted protein [Populus trichocarpa] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| ES848839 | 359 | 208 | 564 | 0 |
| CK269009 | 331 | 245 | 575 | 0 |
| ES809234 | 323 | 236 | 558 | 0 |
| JG588921 | 317 | 241 | 557 | 0 |
| HO466454 | 476 | 110 | 573 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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