Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.009G134400.1 |
Family | GH35 |
Protein Properties | Length: 836 Molecular Weight: 93453.8 Isoelectric Point: 9.1017 |
Chromosome | Chromosome/Scaffold: 09 Start: 10864723 End: 10869129 |
Description | glycosyl hydrolase family 35 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 38 | 342 | 0 |
LIINGKRELLFSGSIHYPRSTPDMWPELILKAKRGGLNVIQTYVFWNIHEPEQGKFNFEGPYDLVKFIKTIGENGMFATLRLGPFIQAEWNHGGLPYWLR EIPDIIFRSDNAPFKHHMEKFVTKIIDMMKEEKLFASQGGPIILSQIENEYNTVQLAYKNLGVSYIQWAGNMALGLNTGVPWVMCKQKDAPGPVINTCNG RHCGDTFTGPNKPNKPSLWTENWTAQFRVFGDPPSQRSAEDTAFSVARWFSKNGSLVNYYMYHGGTNFDRTAASFVTTRYYDEAPLDEYGLQREPKWGHL KDLHR |
Full Sequence |
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Protein Sequence Length: 836 Download |
MAGKNHVFLI ATLLSLLVSS VVAHGGKQVG VTYDERSLII NGKRELLFSG SIHYPRSTPD 60 MWPELILKAK RGGLNVIQTY VFWNIHEPEQ GKFNFEGPYD LVKFIKTIGE NGMFATLRLG 120 PFIQAEWNHG GLPYWLREIP DIIFRSDNAP FKHHMEKFVT KIIDMMKEEK LFASQGGPII 180 LSQIENEYNT VQLAYKNLGV SYIQWAGNMA LGLNTGVPWV MCKQKDAPGP VINTCNGRHC 240 GDTFTGPNKP NKPSLWTENW TAQFRVFGDP PSQRSAEDTA FSVARWFSKN GSLVNYYMYH 300 GGTNFDRTAA SFVTTRYYDE APLDEYGLQR EPKWGHLKDL HRALNLCKKA LLWGNPNVQK 360 LSADVEARLY EQPGTKVCAA FLASNNSKEA ETVKFRGQEY YLPARSISIL PDCKTVVYNT 420 MTVVSQHNSR NFVKSRKTNK LEWNMYSETI PAQLQVDSSL PKELYNLTKD KTDYVWFTTT 480 INVDRRDMNE RKRINPVLRV ASLGHAMVAF VNGEFIGSAH GSQIEKSFVL QHSVDLKPGI 540 NFVTLLGTLV GLPDSGAYME HRYAGPRGVS ILGLNTGTLD LTSNGWGHQV GLSGETAKLF 600 TKEGGGKVTW TKVQKAGPPV TWYKTHFDAP EGKSPVAVRM TGMNKGMIWI NGKSIGRYWM 660 TYVSPLGEPT QSEYHIPRSY LKPTDNLMVI FEEEEANPEK IEILTVNRDT ICSYVTEYHP 720 PSVKSWERKN NKFTPVVDNA KPAAHLKCPN QKKIIAVQFA SFGDPLGTCG DYAVGTCHSL 780 VSKQVVEEHC LGKTSCDIPI DKGLFAGKKD DCPGISKTLA VQVKCSTKDP KRSAN* 840 |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
pfam02449 | Glyco_hydro_42 | 4.0e-6 | 53 | 188 | 150 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. |
COG1874 | LacA | 2.0e-17 | 31 | 188 | 167 | + Beta-galactosidase [Carbohydrate transport and metabolism] |
pfam02140 | Gal_Lectin | 1.0e-19 | 746 | 825 | 83 | + Galactose binding lectin domain. |
pfam01301 | Glyco_hydro_35 | 7.0e-154 | 37 | 344 | 322 | + Glycosyl hydrolases family 35. |
PLN03059 | PLN03059 | 0 | 1 | 826 | 855 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAS76480.1 | 0 | 25 | 826 | 43 | 843 | beta-galactosidase [Gossypium hirsutum] |
GenBank | ACC60982.1 | 0 | 23 | 829 | 20 | 830 | beta-galactosidase 2 precursor [Petunia x hybrida] |
RefSeq | XP_002278545.1 | 0 | 9 | 828 | 8 | 832 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002306183.1 | 0 | 1 | 835 | 1 | 836 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002312963.1 | 0 | 1 | 835 | 1 | 835 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 3e-37 | 22 | 340 | 3 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.003 | 621 | 708 | 509 | 593 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 2e-34 | 31 | 327 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 0.003 | 621 | 720 | 527 | 630 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 2e-34 | 31 | 327 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |